RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 RING1Q06587 406 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 DDR2Q16832 855 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 EML3Q32P44 896 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 C2orf27AQ580R0 203 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 DCP1BQ8IZD4 617 aaKnown RBP21.12■□□□□ 0.97
SSNA1-201ENST00000322310 PIGKQ92643 395 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 ATP2A3Q93084 1043 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 REEP2Q9BRK0 252 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 KCND2Q9NZV8 630 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 DERAQ9Y315 318 aa21.12■□□□□ 0.97
SSNA1-201ENST00000322310 SOBPA7XYQ1 873 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 CKMP06732 381 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 USP4Q13107 963 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 C11orf74Q86VG3 221 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 MDGA1Q8NFP4 955 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 USP33Q8TEY7 942 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 KCNN1Q92952 543 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 LLPHQ9BRT6 129 aaKnown RBP21.11■□□□□ 0.97
SSNA1-201ENST00000322310 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.11■□□□□ 0.97
SSNA1-201ENST00000322310 DPP3Q9NY33 737 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 LHX6Q9UPM6 363 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 DMXL2Q8TDJ6 3036 aa21.11■□□□□ 0.97
SSNA1-201ENST00000322310 TISP43B9A030 160 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 ZC2HC1CQ53FD0 456 aaPredicted RBP21.1■□□□□ 0.97
SSNA1-201ENST00000322310 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 RASSF3Q86WH2 238 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 TTC30AQ86WT1 665 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 EFCAB13Q8IY85 973 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 CCDC33Q8N5R6 958 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 MYCT1Q8N699 235 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 FAM184AQ8NB25 1140 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 CNOT6LQ96LI5 555 aaKnown RBP21.1■□□□□ 0.97
SSNA1-201ENST00000322310 CCSER1Q9C0I3 900 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 LINC00597Q9H2U6 94 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 LIMCH1Q9UPQ0 1083 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 C2CD2Q9Y426 696 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 THADAQ6YHU6 1953 aa21.1■□□□□ 0.97
SSNA1-201ENST00000322310 FASNP49327 2511 aaKnown RBP21.09■□□□□ 0.97
SSNA1-201ENST00000322310 KPNA7A9QM74 516 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 ANKRD63C9JTQ0 380 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 K7EQS6 105 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 USP17L7P0C7H9 530 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 CYP2F1P24903 491 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 MAPK8P45983 427 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 TSPY1Q01534 308 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 CCDC142Q17RM4 750 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 TRIM61Q5EBN2 209 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 ARMCX6Q7L4S7 300 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 CDK5RAP3Q96JB5 506 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 ASB7Q9H672 318 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 KLK13Q9UKR3 277 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 ODF2LQ9ULJ1 636 aa21.09■□□□□ 0.97
SSNA1-201ENST00000322310 DSPP15924 2871 aaKnown RBP21.09■□□□□ 0.97
SSNA1-201ENST00000322310 ANKRD11Q6UB99 2663 aaPredicted RBP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 TRAV19A0A0A6YYK7 116 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 C2orf78A6NCI8 922 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 NOL4O94818 638 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 HNRNPLP14866 589 aaKnown RBP eCLIP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 HMGN5P82970 282 aaKnown RBP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 DHX8Q14562 1220 aaKnown RBP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 TMEM119Q4V9L6 283 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 GPBP1Q86WP2 473 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 ARL14EPQ8N8R7 260 aaPredicted RBP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 SH3RF2Q8TEC5 729 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 RLN3Q8WXF3 142 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 TMEM206Q9H813 350 aa21.08■□□□□ 0.97
SSNA1-201ENST00000322310 UXTQ9UBK9 157 aaPredicted RBP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 CIZ1Q9ULV3 898 aaPredicted RBP21.08■□□□□ 0.97
SSNA1-201ENST00000322310 TCHHQ07283 1943 aa21.08■□□□□ 0.96
SSNA1-201ENST00000322310 NBEAQ8NFP9 2946 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 SPAARA0A1B0GVQ0 90 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 VWA3AA6NCI4 1184 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 FAM13AO94988 1023 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 ACAT1P24752 427 aaKnown RBP21.07■□□□□ 0.96
SSNA1-201ENST00000322310 OPRD1P41143 372 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 ATP2C1P98194 919 aaPredicted RBP21.07■□□□□ 0.96
SSNA1-201ENST00000322310 NR1H3Q13133 447 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 NFE2Q16621 373 aaPredicted RBP21.07■□□□□ 0.96
SSNA1-201ENST00000322310 SV2CQ496J9 727 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 ADALQ6DHV7 355 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 TMEM92Q6UXU6 159 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 PDCL2Q8N4E4 241 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 FRMD1Q8N878 549 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 LRRC15Q8TF66 581 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 TRMT2BQ96GJ1 504 aaKnown RBP21.07■□□□□ 0.96
SSNA1-201ENST00000322310 MYRFLQ96LU7 910 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 IKZF4Q9H2S9 585 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 PARVGQ9HBI0 331 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 TMEM74BQ9NUR3 256 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 GCNT4Q9P109 453 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 EVLQ9UI08 416 aaPredicted RBP21.07■□□□□ 0.96
SSNA1-201ENST00000322310 MMP17Q9ULZ9 603 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 NEUROG3Q9Y4Z2 214 aa21.07■□□□□ 0.96
SSNA1-201ENST00000322310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 TRAK2O60296 914 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 PTGER3P43115 390 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 RPL10AP62906 217 aaKnown RBP21.06■□□□□ 0.96
SSNA1-201ENST00000322310 LMAN2Q12907 356 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 CRY1Q16526 586 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms