RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 FBXL18Q96ME1 805 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 SEPT5Q99719 369 aaPredicted RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 TMEM39AQ9NV64 488 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 SAE1Q9UBE0 346 aaPredicted RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 HSF2BPO75031 334 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 CYBAP13498 195 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 TM4SF4P48230 202 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 SARNPP82979 210 aaKnown RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 C15orf59Q2T9L4 293 aaPredicted RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 PAAF1Q9BRP4 392 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 PRM3Q9NNZ6 103 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 DAAM1Q9Y4D1 1078 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 RNF40O75150 1001 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 AP1G2O75843 785 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 CHRNB2P17787 502 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 SV2CQ496J9 727 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 PPP1R26Q5T8A7 1209 aaPredicted RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 MSL3Q8N5Y2 521 aaKnown RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 CCDC89Q8N998 374 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 BHMTQ93088 406 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 TNIP3Q96KP6 325 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 OSBPL7Q9BZF2 842 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 ELOVL4Q9GZR5 314 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 SIX4Q9UIU6 781 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 BARX2Q9UMQ3 279 aaPredicted RBP11.95□□□□□ -0.5
ZNF543-201ENST00000321545 PCDHB7Q9Y5E2 793 aa11.95□□□□□ -0.5
ZNF543-201ENST00000321545 COL11A1P12107 1806 aaPredicted RBP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 KIAA1217Q5T5P2 1943 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 IGKV6-21A0A0C4DH24 114 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 PODXLO00592 558 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 KPNA6O60684 536 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 RALAP11233 206 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 MCM3P25205 808 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 GRM5P41594 1212 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 TAF5Q15542 800 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 FAM131BQ86XD5 332 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 FEZF2Q8TBJ5 459 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 RSAD2Q8WXG1 361 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 N4BP2L2Q92802 583 aaPredicted RBP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 EXOC4Q96A65 974 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 BRCA2P51587 3418 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 SDK1Q7Z5N4 2213 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 SLCO1A2P46721 670 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 TSPY1Q01534 308 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 DR1Q01658 176 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 TUBB2AQ13885 445 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 DENND2CQ68D51 928 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 RWDD4Q6NW29 188 aaKnown RBP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 PRUNE1Q86TP1 453 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 HOOK3Q86VS8 718 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.5
ZNF543-201ENST00000321545 TUBB2BQ9BVA1 445 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 ITGA11Q9UKX5 1188 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 SBF1O95248 1867 aa11.94□□□□□ -0.5
ZNF543-201ENST00000321545 RAD51CO43502 376 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 B4GALT4O60513 344 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 SKAP2O75563 359 aaPredicted RBP11.93□□□□□ -0.5
ZNF543-201ENST00000321545 PYGMP11217 842 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 GATMP50440 423 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 MGAT5BQ3V5L5 792 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 CDCA2Q69YH5 1023 aaPredicted RBP11.93□□□□□ -0.5
ZNF543-201ENST00000321545 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 PBKQ96KB5 322 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 KATNBL1Q9H079 304 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 O00370 1275 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 NEFHP12036 1026 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 RAG1P15918 1043 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 BDNFP23560 247 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 CARSP49589 748 aaKnown RBP11.93□□□□□ -0.5
ZNF543-201ENST00000321545 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
ZNF543-201ENST00000321545 CASP8Q14790 479 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 NFIL3Q16649 462 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 ALG3Q92685 438 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 FUT8Q9BYC5 575 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 GON4LQ3T8J9 2241 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 GAS8O95995 478 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 KYAT1Q16773 422 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 C9orf57Q5W0N0 161 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 FOXR2Q6PJQ5 311 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 PPP1R21Q6ZMI0 780 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 OTOP2Q7RTS6 562 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 TADA2BQ86TJ2 420 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 CFAP57Q96MR6 1250 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 CPXM1Q96SM3 734 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 RHOBTB2Q9BYZ6 727 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 SDCBP2Q9H190 292 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 STIM2Q9P246 746 aa11.93□□□□□ -0.5
ZNF543-201ENST00000321545 SRGAP2BP0DMP2 458 aa11.92□□□□□ -0.5
ZNF543-201ENST00000321545 ACRP10323 421 aa11.92□□□□□ -0.5
ZNF543-201ENST00000321545 BASP1P80723 227 aaKnown RBP11.92□□□□□ -0.5
ZNF543-201ENST00000321545 SOX4Q06945 474 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms