RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SEC31AO94979 1220 aaKnown RBP18.83■□□□□ 0.6
RAB39A-201ENST00000320578 HEXIM1O94992 359 aaKnown RBP18.83■□□□□ 0.6
RAB39A-201ENST00000320578 GLI1P08151 1106 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 FGFR1P11362 822 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 AARSP49588 968 aaKnown RBP eCLIP18.83■□□□□ 0.6
RAB39A-201ENST00000320578 ZNF252P-AS1Q0IIN9 211 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 DHX34Q14147 1143 aaKnown RBP18.83■□□□□ 0.6
RAB39A-201ENST00000320578 CYP4A22Q5TCH4 519 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 ZNF598Q86UK7 904 aaKnown RBP18.83■□□□□ 0.6
RAB39A-201ENST00000320578 C12orf29Q8N999 325 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 C12orf50Q8NA57 414 aaPredicted RBP18.83■□□□□ 0.6
RAB39A-201ENST00000320578 ANKRD52Q8NB46 1076 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 OSBPL7Q9BZF2 842 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 TRPV6Q9H1D0 765 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 RNF19AQ9NV58 838 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 MIOSQ9NXC5 875 aa18.83■□□□□ 0.6
RAB39A-201ENST00000320578 FAM187AA6NFU0 413 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 PHF2O75151 1096 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 EOMESO95936 686 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 SCNN1AP37088 669 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 SLC7A5Q01650 507 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 TTC30AQ86WT1 665 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 ECHDC2Q86YB7 292 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 UBA3Q8TBC4 463 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 AENQ8WTP8 325 aaKnown RBP18.82■□□□□ 0.6
RAB39A-201ENST00000320578 SEC14L1Q92503 715 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 UROC1Q96N76 676 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 DDX47Q9H0S4 455 aaKnown RBP18.82■□□□□ 0.6
RAB39A-201ENST00000320578 OGFRQ9NZT2 677 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 PCYOX1Q9UHG3 505 aa18.82■□□□□ 0.6
RAB39A-201ENST00000320578 PODXLO00592 558 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 CYB561D2O14569 222 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 RFC1P35251 1148 aaPredicted RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 CETN2P41208 172 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 TAS2R40P59535 323 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 COPS2P61201 443 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 FAM189BP81408 668 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 OGDHQ02218 1023 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 GRIK3Q13003 919 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 CUL1Q13616 776 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 EMBQ6PCB8 327 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 RCOR2Q8IZ40 523 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 PRELID2Q8N945 189 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 LPPQ93052 612 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 VIPAS39Q9H9C1 493 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 PAK6Q9NQU5 681 aaPredicted RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 DDX56Q9NY93 547 aaKnown RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 NR2E1Q9Y466 385 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 GJB6O95452 261 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 COL6A1P12109 1028 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 PTPN7P35236 360 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 LHX1P48742 406 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 FNTAP49354 379 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 BCAT1P54687 386 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 EPHB4P54760 987 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 BST2Q10589 180 aaKnown RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 NNTQ13423 1086 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 SIX1Q15475 284 aaPredicted RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 UPP1Q16831 310 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 RBM41Q96IZ5 413 aaKnown RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 HNRNPABQ99729 332 aaKnown RBP18.81■□□□□ 0.6
RAB39A-201ENST00000320578 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 LRRC19Q9H756 370 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 EPB41L5Q9HCM4 733 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 HOMER3Q9NSC5 361 aa18.81■□□□□ 0.6
RAB39A-201ENST00000320578 ZMYND10O75800 440 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 ACADSBP45954 432 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 SCNN1GP51170 649 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 GUCY2DQ02846 1103 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 AADACL2Q6P093 401 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 ARCQ7LC44 396 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 SENP8Q96LD8 212 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 HSFY1Q96LI6 401 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 TJP2Q9UDY2 1190 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 PTPN22Q9Y2R2 807 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 FRMPD3Q5JV73 1810 aa18.8■□□□□ 0.6
RAB39A-201ENST00000320578 C9IYK1 514 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 F8VP50 259 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 GOLGA8SH3BPF8 625 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 PSMA2P25787 234 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 LMO2P25791 158 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 BFSP2Q13515 415 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 SLC24A5Q71RS6 500 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 OSTM1Q86WC4 334 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 SLCO2A1Q92959 643 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 CAVIN3Q969G5 261 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 NCAPGQ9BPX3 1015 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 RAB17Q9H0T7 212 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 DPEP3Q9H4B8 488 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 METTL5Q9NRN9 209 aaKnown RBP18.79■□□□□ 0.6
RAB39A-201ENST00000320578 AMACRQ9UHK6 382 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 E5RJQ4 531 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 PDGFRBP09619 1106 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 RARAP10276 462 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 SELPP16109 830 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 PCK1P35558 622 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 CLCNKBP51801 687 aa18.79■□□□□ 0.6
RAB39A-201ENST00000320578 ZNF143P52747 638 aaPredicted RBP18.79■□□□□ 0.6
RAB39A-201ENST00000320578 DRG2P55039 364 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms