RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 KRT82Q9NSB4 513 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 CDH9Q9ULB4 789 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 TRIOBPQ9H2D6 2365 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 BEST1O76090 585 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 OAZ2O95190 189 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 SPATA31D3P0C874 917 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 VDRP11473 427 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 BDNFP23560 247 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 IRS1P35568 1242 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 RGS7P49802 495 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 CCDC122Q5T0U0 273 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 SPATA31D4Q6ZUB0 917 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 ANKS3Q6ZW76 656 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 VPS36Q86VN1 386 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 TTC30AQ86WT1 665 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 RNF168Q8IYW5 571 aaPredicted RBP16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 FUKQ8N0W3 1084 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 TTC39CQ8N584 583 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 ATAD1Q8NBU5 361 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 B3GNT5Q9BYG0 378 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 MRPL17Q9NRX2 175 aaKnown RBP16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 CHST7Q9NS84 486 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 TJP2Q9UDY2 1190 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 SLC27A5Q9Y2P5 690 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 BZW2Q9Y6E2 419 aaKnown RBP16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 EPN1Q9Y6I3 576 aaPredicted RBP16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 MYO7AQ13402 2215 aa16.33■□□□□ 0.21
PDLIM5-202ENST00000318007 EPOPA6NHQ4 379 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 HIDE1A8MVS5 230 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 ARHGAP6O43182 974 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 ATMINO43313 823 aaPredicted RBP16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 BMP8BP34820 402 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 MAP3K7CLP57077 242 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 IFRD2Q12894 506 aaPredicted RBP16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 SDHAF4Q5VUM1 108 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 RNF19BQ6ZMZ0 732 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 CRYBG2Q8N1P7 616 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 MYCBPAPQ8TBZ2 947 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 GPR152Q8TDT2 470 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 KCNK16Q96T55 309 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 TMEM30AQ9NV96 361 aa16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-202ENST00000318007 MYH10P35580 1976 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 MED7O43513 233 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 EFEMP2O95967 443 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 CYP2F1P24903 491 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 CYLC1P35663 651 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 DSG1Q02413 1049 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 SLC18A3Q16572 532 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 PAQR9Q6ZVX9 377 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 SPATA2LQ8IUW3 424 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 CLSTN3Q9BQT9 956 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 ZBP1Q9H171 429 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 HESX1Q9UBX0 185 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 CYTH4Q9UIA0 394 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
PDLIM5-202ENST00000318007 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 WDR27A2RRH5 827 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 CXCL14O95715 111 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 FECHP22830 423 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 GPR15P49685 360 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 PLCB3Q01970 1234 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 ROR1Q01973 937 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 ADCY1Q08828 1119 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 GPM6BQ13491 265 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 MRPL58Q14197 206 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 PTPN14Q15678 1187 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 FAM35AQ86V20 835 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 SCN4BQ8IWT1 228 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 SPPL3Q8TCT6 385 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 PIK3R5Q8WYR1 880 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 TIFAQ96CG3 184 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 SEPT5Q99719 369 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 C11orf84Q9BUA3 381 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 ZCWPW1Q9H0M4 648 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 TLR9Q9NR96 1032 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 AP1G2O75843 785 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 PAX3P23760 479 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 CDK17Q00537 523 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 PDE4CQ08493 712 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 BMS1Q14692 1282 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 SPA17Q15506 151 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 RAB30Q15771 203 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 CYP4A22Q5TCH4 519 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 WDTC1Q8N5D0 677 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 CRISPLD1Q9H336 500 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms