RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 AMPD1P23109 780 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 GEMIN4P57678 1058 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 RPL10AP62906 217 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 GRIK3Q13003 919 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DCAF12L1Q5VU92 463 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 VSTM1Q6UX27 236 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 C1orf131Q8NDD1 294 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 GDPD5Q8WTR4 605 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 RBM41Q96IZ5 413 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 ACSS2Q9NR19 701 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 GRHL1Q9NZI5 618 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 TDRKHQ9Y2W6 561 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 MTO1Q9Y2Z2 717 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 TSC22D4Q9Y3Q8 395 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 MYH13Q9UKX3 1938 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 RNF103-CHMP3A0A140T963 221 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 IPO5O00410 1097 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 NDC80O14777 642 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 IRF6O14896 467 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DDX3YO15523 660 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 PROCP04070 461 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 TMEM191BP0C7N4 346 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 FGFR3P22607 806 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 RPA1P27694 616 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 CIITAP33076 1130 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SERPINB5P36952 375 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SH3BGRP55822 239 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 NFX1Q12986 1120 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 UBAP2LQ14157 1087 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SNRNP35Q16560 246 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 ACSBG2Q5FVE4 666 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 C16orf46Q6P387 395 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 EEPD1Q7L9B9 569 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 THNSL1Q8IYQ7 743 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DEFB107AQ8IZN7 70 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SH3TC2Q8TF17 1288 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 EXT2Q93063 718 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DTNBP1Q96EV8 351 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 FERMT1Q9BQL6 677 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 PREBQ9HCU5 417 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 ARHGEF3Q9NR81 526 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 ETNK2Q9NVF9 386 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SENP1Q9P0U3 644 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 WHRNQ9P202 907 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 GTF3C4Q9UKN8 822 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 CEP350Q5VT06 3117 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SIPA1L3O60292 1781 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SRRM3A6NNA2 597 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 EML1O00423 815 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SLC16A3O15427 465 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 MSH4O15457 936 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 TBX10O75333 385 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 RTN3O95197 1032 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 MT-CO1P00395 513 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 RBP3P10745 1247 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 PRELPP51888 382 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 ADARP55265 1226 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 BPIFB4P59827 614 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SLC12A1Q13621 1099 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 SBK1Q52WX2 424 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 HABP4Q5JVS0 413 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DACT2Q5SW24 774 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DENND5BQ6ZUT9 1274 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 CLNKQ7Z7G1 428 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 TRIM42Q8IWZ5 723 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 C7orf31Q8N865 590 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DIS3LQ8TF46 1054 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 PGBD4Q96DM1 585 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 DCLK3Q9C098 648 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 MMADHCQ9H3L0 296 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 UVRAGQ9P2Y5 699 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 ZC3H7BQ9UGR2 993 aaKnown RBP7.87□□□□□ -1.15
CDHR3-201ENST00000317716 AURKCQ9UQB9 309 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 MYH6P13533 1939 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 CACNA1SQ13698 1873 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 A0A0A6YYK5 440 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 ARHGAP10A1A4S6 786 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 WNT10BO00744 389 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 KRT38O76015 456 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 LCA5LO95447 670 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 MCF2P10911 925 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 VCAM1P19320 739 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 ECHS1P30084 290 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CA8P35219 290 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 MLH1P40692 756 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 NUDT2P50583 147 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CDH6P55285 790 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 PPP3CAQ08209 521 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 PRPSAP1Q14558 356 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RPS6KA2Q15349 733 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 RBM44Q6ZP01 1051 aaKnown RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 C4orf50Q6ZRC1 276 aa7.86□□□□□ -1.15
CDHR3-201ENST00000317716 CDR2LQ86X02 465 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 ZSCAN18Q8TBC5 510 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 OXNAD1Q96HP4 312 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-201ENST00000317716 NMUR2Q9GZQ4 415 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms