RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 KIF20AO95235 890 aa19■□□□□ 0.63
TPM1-203ENST00000317516 ATICP31939 592 aa19■□□□□ 0.63
TPM1-203ENST00000317516 GNL1P36915 607 aaPredicted RBP19■□□□□ 0.63
TPM1-203ENST00000317516 MAGEA11P43364 429 aa19■□□□□ 0.63
TPM1-203ENST00000317516 SYKP43405 635 aa19■□□□□ 0.63
TPM1-203ENST00000317516 TNNC1P63316 161 aa19■□□□□ 0.63
TPM1-203ENST00000317516 FZD5Q13467 585 aa19■□□□□ 0.63
TPM1-203ENST00000317516 KMT5BQ4FZB7 885 aa19■□□□□ 0.63
TPM1-203ENST00000317516 VSTM1Q6UX27 236 aa19■□□□□ 0.63
TPM1-203ENST00000317516 MAMSTRQ6ZN01 415 aa19■□□□□ 0.63
TPM1-203ENST00000317516 RALGPS2Q86X27 583 aaPredicted RBP19■□□□□ 0.63
TPM1-203ENST00000317516 SCN4BQ8IWT1 228 aa19■□□□□ 0.63
TPM1-203ENST00000317516 MAML2Q8IZL2 1156 aaPredicted RBP19■□□□□ 0.63
TPM1-203ENST00000317516 MAB21L3Q8N8X9 362 aa19■□□□□ 0.63
TPM1-203ENST00000317516 ATRIPQ8WXE1 791 aa19■□□□□ 0.63
TPM1-203ENST00000317516 TRMT2BQ96GJ1 504 aaKnown RBP19■□□□□ 0.63
TPM1-203ENST00000317516 MYRFLQ96LU7 910 aa19■□□□□ 0.63
TPM1-203ENST00000317516 CEP295NLQ96MC4 621 aa19■□□□□ 0.63
TPM1-203ENST00000317516 NCANO14594 1321 aa19■□□□□ 0.63
TPM1-203ENST00000317516 RIF1Q5UIP0 2472 aaKnown RBP18.99■□□□□ 0.63
TPM1-203ENST00000317516 SLC38A8A6NNN8 435 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 KLRC4O43908 158 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 KINO60870 393 aaKnown RBP18.99■□□□□ 0.63
TPM1-203ENST00000317516 TACC1O75410 805 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 NOL4O94818 638 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 PRAMEF12O95522 483 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 PDGFRBP09619 1106 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 LMO2P25791 158 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 GPR15P49685 360 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 STK4Q13043 487 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 LRRC32Q14392 662 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 WDR72Q3MJ13 1102 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 SDHAF4Q5VUM1 108 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 TMEM150AQ86TG1 271 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 MON1AQ86VX9 555 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 ZNF687Q8N1G0 1237 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 FSIP1Q8NA03 581 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 OR6B3Q8NGW1 331 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 KBTBD7Q8WVZ9 684 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
TPM1-203ENST00000317516 LRRC3BQ96PB8 259 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 FAM126AQ9BYI3 521 aaPredicted RBP18.99■□□□□ 0.63
TPM1-203ENST00000317516 CHRDQ9H2X0 955 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 KIF9Q9HAQ2 790 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 TDP1Q9NUW8 608 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 EHD2Q9NZN4 543 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 HPSEQ9Y251 543 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 ANK1P16157 1881 aa18.99■□□□□ 0.63
TPM1-203ENST00000317516 STAU1O95793 577 aaKnown RBP18.98■□□□□ 0.63
TPM1-203ENST00000317516 CYP27A1Q02318 531 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 MTAPQ13126 283 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 TXNDC8Q6A555 127 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 CC2D1AQ6P1N0 951 aaPredicted RBP18.98■□□□□ 0.63
TPM1-203ENST00000317516 SLC9A9Q8IVB4 645 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 TMEM174Q8WUU8 243 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 CCDC34Q96HJ3 373 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 ZSCAN32Q9NX65 697 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 ZDHHC9Q9Y397 364 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 PCDHGA2Q9Y5H1 932 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 F5P12259 2224 aa18.98■□□□□ 0.63
TPM1-203ENST00000317516 SPECC1L-ADORA2AF8WAN1 911 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 PDXKO00764 312 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 HCRTO43612 131 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 ATP2C2O75185 946 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 CHRNB1P11230 501 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 ANXA13P27216 316 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 GRIK1P39086 918 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 CCR3P51677 355 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 NRLP54845 237 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 PSMC1P62191 440 aaKnown RBP18.97■□□□□ 0.63
TPM1-203ENST00000317516 AMPD2Q01433 879 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 BIRC3Q13489 604 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 ITPRIPL2Q3MIP1 535 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 DGKKQ5KSL6 1271 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 KIAA0895Q8NCT3 520 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 MYCBPAPQ8TBZ2 947 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 PARD3BQ8TEW8 1205 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 ZNF516Q92618 1163 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 MYLPFQ96A32 169 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 ZFYVE19Q96K21 471 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 SPATA17Q96L03 361 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 SMG9Q9H0W8 520 aaKnown RBP18.97■□□□□ 0.63
TPM1-203ENST00000317516 GKN1Q9NS71 199 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 DMAC2Q9NW81 257 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 GTSE1Q9NYZ3 720 aa18.97■□□□□ 0.63
TPM1-203ENST00000317516 NXF1Q9UBU9 619 aaKnown RBP18.97■□□□□ 0.63
TPM1-203ENST00000317516 FAM237AA0A1B0GTK4 181 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 A0A1W2PQ27 194 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 A0A1W2PQ64 194 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 A0A1W2PQD8 194 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 TRIM66O15016 1216 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 CALUO43852 315 aaPredicted RBP18.96■□□□□ 0.63
TPM1-203ENST00000317516 CLSTN1O94985 981 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 RPN1P04843 607 aaKnown RBP18.96■□□□□ 0.63
TPM1-203ENST00000317516 BDNFP23560 247 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 CTHP32929 405 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 PDE6CP51160 858 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 NDUFA8P51970 172 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 MYL6P60660 151 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 ZNF268Q14587 947 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms