RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CCDC63Q8NA47 563 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SLC35G2Q8TBE7 412 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MAGOHBQ96A72 148 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RHOXF2Q9BQY4 288 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 HSD3B7Q9H2F3 369 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ZC4H2Q9NQZ6 224 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 TYW5A2RUC4 315 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ANKRD63C9JTQ0 380 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 H3BRJ5 948 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 FOXN3O00409 490 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 KRT3P12035 628 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MYCLP1P12525 358 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SMPD1P17405 629 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CD58P19256 250 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RFC2P35250 354 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 VPS41P49754 854 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 AIF1P55008 147 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 OSTNP61366 133 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MBTD1Q05BQ5 628 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 NR1H3Q13133 447 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 FBXO47Q5MNV8 452 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 APTXQ7Z2E3 356 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 FAM71BQ8TC56 605 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 BCAS4Q8TDM0 211 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 TAS1R2Q8TE23 839 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 C18orf25Q96B23 403 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PALMDQ9NP74 551 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SETD4Q9NVD3 440 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 DDX20Q9UHI6 824 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 USTQ9Y2C2 406 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 TADA3O75528 432 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 TSPAN9O75954 239 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ZNF286BP0CG31 522 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 GNL1P36915 607 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CLCN2P51788 898 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 DR1Q01658 176 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 NAA30Q147X3 362 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CNGA2Q16280 664 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PKN2Q16513 984 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 C1QTNF12Q5T7M4 302 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 NAA35Q5VZE5 725 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 LMBRD2Q68DH5 695 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 DAW1Q8N136 415 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SLC39A3Q9BRY0 314 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 BRD8Q9H0E9 1235 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ISCUQ9H1K1 167 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RSPH9Q9H1X1 276 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RSAD1Q9HA92 442 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SRRDQ9UH36 339 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PCDHGC3Q9UN70 934 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PCDHB7Q9Y5E2 793 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PTCH2Q9Y6C5 1203 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ITGB3P05106 788 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CYP1A2P05177 515 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RALAP11233 206 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 HOXD8P13378 290 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CYP2C18P33260 490 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SERPINB6P35237 376 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 BST2Q10589 180 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 GRIK3Q13003 919 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PLD1Q13393 1074 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PTGISQ16647 500 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 Q3C1V9 767 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 HSDL1Q3SXM5 330 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MEI1Q5TIA1 1274 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 DENND2CQ68D51 928 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 TAPT1Q6NXT6 567 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 KCTD6Q8NC69 237 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ZNF483Q8TF39 744 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RNF139Q8WU17 664 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 HSFY1Q96LI6 401 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 VRTNQ9H8Y1 702 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CNGB3Q9NQW8 809 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 CISHQ9NSE2 258 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 DPP7Q9UHL4 492 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ATP8A1Q9Y2Q0 1164 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 NOC2LQ9Y3T9 749 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ADCY6O43306 1168 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 PHF2O75151 1096 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 EOMESO95936 686 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 C4BPAP04003 597 aaKnown RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 GLI1P08151 1106 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 TAL1P17542 331 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 CST5P28325 142 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 THPOP40225 353 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 GSCP56915 257 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 WDR93Q6P2C0 686 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 ZNF571Q7Z3V5 609 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 SDR16C5Q8N3Y7 309 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 EXD1Q8NHP7 514 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 SH3TC2Q8TF17 1288 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 STK32AQ8WU08 396 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 GCNAQ96QF7 691 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 KIFC3Q9BVG8 833 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 NMRK2Q9NPI5 230 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 ITGB1BP2Q9UKP3 347 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 BLOC1S6Q9UL45 172 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 TTC7AQ9ULT0 858 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms