RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PPP1R26Q5T8A7 1209 aaPredicted RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 LCLAT1Q6UWP7 414 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 GLB1LQ6UWU2 654 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 DPH6Q7L8W6 267 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 CPNE8Q86YQ8 564 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM35BQ8NCS4 154 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF564Q8TBZ8 553 aaPredicted RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 HASPINQ8TF76 798 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TRIM7Q9C029 511 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 LHX5Q9H2C1 402 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 ELAC1Q9H777 363 aaKnown RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 ABCB6Q9NP58 842 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 AVENQ9NQS1 362 aaPredicted RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 FAM49BQ9NUQ9 324 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM39AQ9NV64 488 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TBC1D13Q9NVG8 400 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 ADAM22Q9P0K1 906 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 CDC23Q9UJX2 597 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TSPAN16Q9UKR8 245 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 SNX12Q9UMY4 172 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 HYOU1Q9Y4L1 999 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 COL4A6Q14031 1691 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TCRBV5S1A1TA0A578 114 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TRIM43BA6NCK2 446 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 I3L4J1 428 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 GABRDO14764 452 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF185O15231 689 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 KIF4AO95239 1232 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 GJB6O95452 261 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 MYBL1P10243 752 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 GPD2P43304 727 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 GOLGA7BQ2TAP0 167 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PKDCCQ504Y2 493 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 KIAA0319Q5VV43 1072 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 DAAM2Q86T65 1068 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 NT5DC3Q86UY8 548 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TTC30AQ86WT1 665 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 COLGALT2Q8IYK4 626 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CRYBG2Q8N1P7 616 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PLCD3Q8N3E9 789 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 UBA3Q8TBC4 463 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TRIM43Q96BQ3 446 aaPredicted RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TRIM11Q96F44 468 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 DDX27Q96GQ7 796 aaKnown RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 VCPIP1Q96JH7 1222 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 UROC1Q96N76 676 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CASD1Q96PB1 797 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 OSBPL9Q96SU4 736 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PSMB7Q99436 277 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CARD6Q9BX69 1037 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 SNX25Q9H3E2 840 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 UVRAGQ9P2Y5 699 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 HCSTQ9UBK5 93 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 KIAA1257Q9ULG3 409 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TIMM13Q9Y5L4 95 aaPredicted RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 SAR1BQ9Y6B6 198 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TULP2O00295 520 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 ATP2C2O75185 946 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 B3GAT3O94766 335 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PARNO95453 639 aaKnown RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 ERBB2P04626 1255 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CCDC130P13994 396 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 ACAT1P24752 427 aaKnown RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TKTP29401 623 aaKnown RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PSMC1P62191 440 aaKnown RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 MAMLD1Q13495 774 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CYP4A22Q5TCH4 519 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 ARHGAP17Q68EM7 881 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PLEKHA7Q6IQ23 1121 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 C11orf63Q6NUN7 778 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PPP1R2P3Q6NXS1 205 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 DSTYKQ6XUX3 929 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 TMEFF1Q8IYR6 380 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 URGCPQ8TCY9 931 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 COG1Q8WTW3 980 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CPXM1Q96SM3 734 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 DNAJB4Q9UDY4 337 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 CEP83Q9Y592 693 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 PCDHB7Q9Y5E2 793 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 V9GYY5 206 aaPredicted RBP7.37□□□□□ -1.23
PTCD2-201ENST00000308077 VWA8A3KMH1 1905 aa7.37□□□□□ -1.23
PTCD2-201ENST00000308077 LAMA2P24043 3122 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM110-MUSTN1A8MSY1 372 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 M0QZQ0 153 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CTIFO43310 598 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 SLU7O95391 586 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CALB1P05937 261 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 FAM163BP0C2L3 166 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CXCR5P32302 372 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 DNA2P51530 1060 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PDCLQ13371 301 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 MESDQ14696 234 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 STILQ15468 1287 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 LIN9Q5TKA1 542 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms