RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 LEMD2Q8NC56 503 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 PCED1BQ96HM7 432 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 PKMYT1Q99640 499 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 CORO1BQ9BR76 489 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 ELOVL4Q9GZR5 314 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 CRTAC1Q9NQ79 661 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 CISHQ9NSE2 258 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 ASB3Q9Y575 518 aa11.71□□□□□ -0.53
CSPG4P2Y-201ENST00000306853 ANAPC1Q9H1A4 1944 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ZNF197O14709 1029 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 SOAT2O75908 522 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CSH1P0DML2 217 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CSH2P0DML3 217 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 BDNFP23560 247 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CYP2F1P24903 491 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GRIK1P39086 918 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MAGEA11P43364 429 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ZNF165P49910 485 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ZP2Q05996 745 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ORC1Q13415 861 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CDKAL1Q5VV42 579 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 TATDN2Q93075 761 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ARID3AQ99856 593 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CRACR2AQ9BSW2 395 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FAM49BQ9NUQ9 324 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FANCLQ9NW38 375 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 TAB2Q9NYJ8 693 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 DNMT3BQ9UBC3 853 aaKnown RBP11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 HMGXB4Q9UGU5 601 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 USTQ9Y2C2 406 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 NME7Q9Y5B8 376 aa11.7□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 PRUNE2Q8WUY3 3088 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 HELZP42694 1942 aaKnown RBP11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FGF19O95750 216 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CAVIN2O95810 425 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MYL4P12829 197 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ATF6P18850 670 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 NTHL1P78549 312 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GCNT1Q02742 428 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 KRT31Q15323 416 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ENOSF1Q7L5Y1 443 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FAM35AQ86V20 835 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GIPC2Q8TF65 315 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 TMEM176AQ96HP8 235 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 EHD2Q9NZN4 543 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CEP72Q9P209 647 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 UXTQ9UBK9 157 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 PCDHB4Q9Y5E5 795 aa11.69□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MYO10Q9HD67 2058 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 C2CD4DB7Z1M9 353 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CLDN5O00501 218 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 AP1G2O75843 785 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CCDC130P13994 396 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ADORA2BP29275 332 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CDC25CP30307 473 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GPR15P49685 360 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MFAP3P55082 362 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 DDR2Q16832 855 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 MIIPQ5JXC2 388 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 TRIM65Q6PJ69 517 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 DNAJB7Q7Z6W7 309 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ARHGEF19Q8IW93 802 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 GJD3Q8N144 294 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CRYBG2Q8N1P7 616 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 LMO3Q8TAP4 145 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 SLC2A14Q8TDB8 520 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 ING5Q8WYH8 240 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 CEP295NLQ96MC4 621 aa11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
CSPG4P2Y-201ENST00000306853 NECAB3Q96P71 396 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms