RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 MORF4L2Q15014 288 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 SGSM1Q2NKQ1 1148 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 DRICH1Q6PGQ1 229 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 RHPN2Q8IUC4 686 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 DENND1AQ8TEH3 1009 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 SMC6Q96SB8 1091 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 KLF6Q99612 283 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 BTBD7Q9P203 1132 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 DRG1Q9Y295 367 aaKnown RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 C3orf70A6NLC5 250 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 ALOX15BO15296 676 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 LRCH4O75427 683 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 MAFO75444 373 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 FGFR1P11362 822 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 KRT3P12035 628 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 RFC5P40937 340 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 MSH2P43246 934 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 CTCFP49711 727 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 MYO1EQ12965 1108 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 CRYMQ14894 314 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 TMEM132AQ24JP5 1023 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 LRRC38Q5VT99 294 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 CENPUQ71F23 418 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 DPH6Q7L8W6 267 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 TDRPQ86YL5 185 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 TTC25Q96NG3 672 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 SOWAHBA6NEL2 793 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 PIK3R2O00459 728 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 OGTO15294 1046 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 MAGEB2O15479 319 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 PRPF4O43172 522 aaKnown RBP eCLIP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 ANP32DO95626 131 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 LSM8O95777 96 aaKnown RBP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 KRT4P19013 534 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 RPS12P25398 132 aaKnown RBP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 SLC18A1P54219 525 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 SLC8A3P57103 927 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 HIF1AQ16665 826 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 ZPBP2Q6X784 338 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 NCAPG2Q86XI2 1143 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 SLC35B2Q8TB61 432 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 NSMCE1Q8WV22 266 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 NLRP4Q96MN2 994 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 XYLT2Q9H1B5 865 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 MYLK2Q9H1R3 596 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 STARD13Q9Y3M8 1113 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 CLUHO75153 1309 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 UNC5CO95185 931 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 ITGAVP06756 1048 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 HOXC6P09630 235 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 PSMC1P62191 440 aaKnown RBP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 MAPK6Q16659 721 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 HSDL1Q3SXM5 330 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 EEF1DP3Q658K8 133 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 PPP1R2P3Q6NXS1 205 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 RGS9BPQ6ZS82 235 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 UNC45BQ8IWX7 931 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 DNERQ8NFT8 737 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 FBF1Q8TES7 1133 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 CPT1BQ92523 772 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 NKD2Q969F2 451 aaPredicted RBP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 MIEF2Q96C03 454 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 ERP27Q96DN0 273 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 CPXM1Q96SM3 734 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 PPP1R16BQ96T49 567 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 ETNK1Q9HBU6 452 aa15.89■□□□□ 0.13
CSDC2-201ENST00000306149 CPSF3Q9UKF6 684 aaKnown RBP15.89■□□□□ 0.13
CSDC2-201ENST00000306149 INO80B-WBP1J3KQ70 363 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 WFS1O76024 890 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 ARIH2O95376 493 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 EIF4BP23588 611 aaKnown RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 MAB21L3Q8N8X9 362 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 PYROXD1Q8WU10 500 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 TMEM237Q96Q45 408 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 WDR83Q9BRX9 315 aaKnown RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 SYNCQ9H7C4 482 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 PCDH9Q9HC56 1237 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 TXLNGQ9NUQ3 528 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 HMGXB4Q9UGU5 601 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 CEP83Q9Y592 693 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 KAT6AQ92794 2004 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 ABLIM1O14639 778 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 RPL22P35268 128 aaKnown RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 SLC25A11Q02978 314 aaKnown RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 CCDC142Q17RM4 750 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 RAB6CQ53S08 254 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 C3orf62Q6ZUJ4 267 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 KIRREL3Q8IZU9 778 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 FAM71DQ8N9W8 422 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 SEPT1Q8WYJ6 367 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 HSPH1Q92598 858 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 TWNKQ96RR1 684 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 RAB6CQ9H0N0 254 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 ALG13Q9NP73 1137 aaKnown RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 METTL5Q9NRN9 209 aaKnown RBP15.88■□□□□ 0.13
CSDC2-201ENST00000306149 DDX56Q9NY93 547 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms