RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
DDX54-201ENST00000306014 LRRC19Q9H756 370 aa13.88□□□□□ -0.19
DDX54-201ENST00000306014 SLCO1B3Q9NPD5 702 aa13.88□□□□□ -0.19
DDX54-201ENST00000306014 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
DDX54-201ENST00000306014 MAFGO15525 162 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 MAPTP10636 758 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 ETS1P14921 441 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 RPA3P35244 121 aaPredicted RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 TGFB2P61812 414 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 DYNC1I2Q13409 638 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 RWDD4Q6NW29 188 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 ARHGAP18Q8N392 663 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 CCDC33Q8N5R6 958 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 EXT2Q93063 718 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 MKL1Q969V6 931 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 CCDC68Q9H2F9 335 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 FAM49BQ9NUQ9 324 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 SNX9Q9Y5X1 595 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 COL14A1Q05707 1796 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 TOPAZ1Q8N9V7 1692 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 FOXO6A8MYZ6 492 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 SMAPO00193 183 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 STIP1P31948 543 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 RASA2Q15283 850 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 ATP13A4Q4VNC1 1196 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 MIEF2Q96C03 454 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 SHOC2Q9UQ13 582 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 NOD1Q9Y239 953 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 ROBO3Q96MS0 1386 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 hCG_2014768A0A024R1R8 64 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 KRT16P08779 473 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 IREB2P48200 963 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 POU5F1BQ06416 359 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 XRCC4Q13426 336 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 TMCO4Q5TGY1 634 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 PRAMEF18Q5VWM3 479 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 ZNF75CPQ92670 426 aaPredicted RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 TRPV6Q9H1D0 765 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 PCDH9Q9HC56 1237 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 UNC5CO95185 931 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 ACADSP16219 412 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 RFC1P35251 1148 aaPredicted RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 KPNA2P52292 529 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 MYL6P60660 151 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 LRRC43Q8N309 656 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 SHC3Q92529 594 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 PCDHB18PQ96TA0 734 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 NACA2Q9H009 215 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 AVENQ9NQS1 362 aaPredicted RBP13.87□□□□□ -0.19
DDX54-201ENST00000306014 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
DDX54-201ENST00000306014 AIM2O14862 343 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 CYP1A2P05177 515 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 GPD1P21695 349 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 CALB2P22676 271 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
DDX54-201ENST00000306014 CNGA3Q16281 694 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 CRELD2Q6UXH1 353 aaPredicted RBP13.86□□□□□ -0.19
DDX54-201ENST00000306014 MICALL2Q8IY33 904 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 RDM1Q8NG50 284 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 SAE1Q9UBE0 346 aaPredicted RBP13.86□□□□□ -0.19
DDX54-201ENST00000306014 GH1P01241 217 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 OATP04181 439 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ZFXP17010 805 aaPredicted RBP13.86□□□□□ -0.19
DDX54-201ENST00000306014 SERPINB3P29508 390 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 SERPINB9P50453 376 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 AQP5P55064 265 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 NCALDP61601 193 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
DDX54-201ENST00000306014 BMPR2Q13873 1038 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ACCSLQ4AC99 568 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ZCCHC9Q8N567 271 aaKnown RBP13.86□□□□□ -0.19
DDX54-201ENST00000306014 GPRASP2Q96D09 838 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 BCAS3Q9H6U6 928 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ARMCX1Q9P291 453 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 VAV3Q9UKW4 847 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 F8VP50 259 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ADCY3O60266 1144 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 TAF12Q16514 161 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ARL13BQ3SXY8 428 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 STK32AQ8WU08 396 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 SEPT1Q8WYJ6 367 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 FAM198AQ9UFP1 575 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 GRID1Q9ULK0 1009 aa13.86□□□□□ -0.19
DDX54-201ENST00000306014 ELK3P41970 407 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 NLRP11P59045 1033 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 LLGL2Q6P1M3 1020 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 TRIM67Q6ZTA4 783 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 SLC9A9Q8IVB4 645 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 KIAA1683Q9H0B3 1180 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 SLC12A6Q9UHW9 1150 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms