RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 HSF2BPO75031 334 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 RFPL2O75678 378 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 HEXIM1O94992 359 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GOLGA6DP0CG33 693 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 RPL17P18621 184 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GUCY2CP25092 1073 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 STAT1P42224 750 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 MATR3P43243 847 aaKnown RBP eCLIP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 CASP4P49662 377 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 ARID5AQ03989 594 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 PPP2R5AQ15172 486 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 DCAF17Q5H9S7 520 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 ZFYVE27Q5T4F4 411 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 LRRC31Q6UY01 552 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 OTOP3Q7RTS5 596 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GPR149Q86SP6 731 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 CEP57Q86XR8 500 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 SLC9A9Q8IVB4 645 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 CD302Q8IX05 232 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 COLGALT2Q8IYK4 626 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 FAM186BQ8IYM0 893 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 PLCD3Q8N3E9 789 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 TPCN2Q8NHX9 752 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 WHAMMQ8TF30 809 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 HASPINQ8TF76 798 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 TMEM174Q8WUU8 243 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 RIN2Q8WYP3 895 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GDAP1L1Q96MZ0 367 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 TMEM175Q9BSA9 504 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 POLR3FQ9H1D9 316 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 NXF3Q9H4D5 531 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 SFXN1Q9H9B4 322 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GPRC5CQ9NQ84 441 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 XPNPEP1Q9NQW7 623 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 MAN1C1Q9NR34 630 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GOLGA6AQ9NYA3 693 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 GCNT4Q9P109 453 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 IRAK3Q9Y616 596 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 TECTAO75443 2155 aa8.35□□□□□ -1.07
TM4SF1-201ENST00000305366 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 LRRIQ4A6NIV6 560 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 PI15O43692 258 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 NARSO43776 548 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 TADA2AO75478 443 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 SOD2P04179 222 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 GLI1P08151 1106 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 CFHP08603 1231 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 H2AFZP0C0S5 128 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 ARF4P18085 180 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 RFX1P22670 979 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 GLRA2P23416 452 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 PTENP60484 403 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 SKOR1P84550 965 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 CAPSQ13938 189 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 MXD4Q14582 209 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 TCERG1LQ5VWI1 586 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 ASTLQ6HA08 431 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 NOTUMQ6P988 496 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 H2AFVQ71UI9 128 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 ZNF720Q7Z2F6 126 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 ZDHHC14Q8IZN3 488 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 IQCKQ8N0W5 287 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 SIX5Q8N196 739 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 CACTIN-AS1Q8N1I8 211 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 RASGEF1CQ8N431 466 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 MYCT1Q8N699 235 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 TSEN2Q8NCE0 465 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 SPDYE1Q8NFV5 336 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 SLC30A5Q8TAD4 765 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 RPS6KC1Q96S38 1066 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 SYT11Q9BT88 431 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 COLEC11Q9BWP8 271 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 STRA6Q9BX79 667 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 KCNK12Q9HB15 430 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 UBN1Q9NPG3 1134 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 MARCH5Q9NX47 278 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 AJAP1Q9UKB5 411 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 TRIOO75962 3097 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 NCANO14594 1321 aa8.34□□□□□ -1.07
TM4SF1-201ENST00000305366 CCDC188H7C350 402 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 DDX3XO00571 662 aaKnown RBP eCLIP8.33□□□□□ -1.081e-13■□□□□ 11.3
TM4SF1-201ENST00000305366 CLIC2O15247 247 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 INPPL1O15357 1258 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 LILRB3O75022 631 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PPP1R37O75864 691 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 GLUD1P00367 558 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ADH1AP07327 375 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CCDC172P0C7W6 258 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 MAPTP10636 758 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 SOX5P35711 763 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 FMO5P49326 533 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 GLUD2P49448 558 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CARSP49589 748 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 GUCY2DQ02846 1103 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms