RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 TROAPQ12815 778 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 DPYDQ12882 1025 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 FBXO47Q5MNV8 452 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 PRAMEF19Q5SWL8 479 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 FAM47EQ6ZV65 393 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 OTULINQ96BN8 352 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 KLHL29Q96CT2 875 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 PKD2L2Q9NZM6 624 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 KIF17Q9P2E2 1029 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 NCKAP1Q9Y2A7 1128 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 VDRP11473 427 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 GARTP22102 1010 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 PBLDP30039 288 aaPredicted RBP13.61□□□□□ -0.23
ABR-202ENST00000302538 FKBP1BP68106 108 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 GJC2Q5T442 439 aaPredicted RBP13.61□□□□□ -0.23
ABR-202ENST00000302538 KRT80Q6KB66 452 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 RFWD2Q8NHY2 731 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 CDK5RAP1Q96SZ6 601 aaKnown RBP13.61□□□□□ -0.23
ABR-202ENST00000302538 CGRRF1Q99675 332 aa13.61□□□□□ -0.23
ABR-202ENST00000302538 SLC15A5A6NIM6 579 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 CBX4O00257 560 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 RHOBTB1O94844 696 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 LRRC74AQ0VAA2 488 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 NCAPHQ15003 741 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 ERAP2Q6P179 960 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 MOB2Q70IA6 237 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 NECAB2Q7Z6G3 386 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 DAGLBQ8NCG7 672 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 NMRK2Q9NPI5 230 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 STX18Q9P2W9 335 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 KIAA1257Q9ULG3 409 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 H2AFYO75367 372 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 BCAT1P54687 386 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 NAPEPLDQ6IQ20 393 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 MOXD1Q6UVY6 613 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 FIBCD1Q8N539 461 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 VGLL2Q8N8G2 317 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 TRAPPC12Q8WVT3 735 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 ZNF558Q96NG5 402 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 PDGFDQ9GZP0 370 aaPredicted RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 CHCHD3Q9NX63 227 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 PSD3Q9NYI0 1048 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 HDAC6Q9UBN7 1215 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 ZC3H7BQ9UGR2 993 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 CAPN11Q9UMQ6 739 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 MED24O75448 989 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 MAPK9P45984 424 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 PDCD2Q16342 344 aaPredicted RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 FKBP1CQ5VVH2 108 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 PALB2Q86YC2 1186 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 CBWD2Q8IUF1 395 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 KIF2CQ99661 725 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 PARD6BQ9BYG5 372 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 UBXN6Q9BZV1 441 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 FBXO21O94952 628 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 CXCL8P10145 99 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 CACUL1Q86Y37 369 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 SYT15Q9BQS2 421 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 LIMA1Q9UHB6 759 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 SPACA6W5XKT8 324 aa13.6□□□□□ -0.23
ABR-202ENST00000302538 XRN1Q8IZH2 1706 aaKnown RBP13.6□□□□□ -0.23
ABR-202ENST00000302538 GRID2IPA4D2P6 1211 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
ABR-202ENST00000302538 SPAG7O75391 227 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 ANXA9O76027 345 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 PYGBP11216 843 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 SP100P23497 879 aaPredicted RBP13.59□□□□□ -0.23
ABR-202ENST00000302538 RAP1GAPP47736 663 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 KRT72Q14CN4 511 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 TTLL9Q3SXZ7 439 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABR-202ENST00000302538 ZW10O43264 779 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 NDUFV1P49821 464 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 RAP1GDS1P52306 607 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
ABR-202ENST00000302538 ARID5BQ14865 1188 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 C4orf19Q8IY42 314 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 APBA2Q99767 749 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 XPO7Q9UIA9 1087 aaKnown RBP13.59□□□□□ -0.23
ABR-202ENST00000302538 ABCC6O95255 1503 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 CARNS1A5YM72 827 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 PTGER2P43116 358 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 CAPZA2P47755 286 aa13.59□□□□□ -0.23
ABR-202ENST00000302538 MAP2K5Q13163 448 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms