RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PXMP2Q9NR77 195 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.72□□□□□ -0.05
SDC2-201ENST00000302190 AGAP1Q9UPQ3 857 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 A0A1W2PPM1 405 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 BTNL10A8MVZ5 291 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 H3BRJ5 948 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 CREB3O43889 395 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 GJB1P08034 283 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 CFHP08603 1231 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 PDGFRBP09619 1106 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 MMP13P45452 471 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 SLC8A3P57103 927 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 ROR1Q01973 937 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 TSC22D3Q99576 134 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 MED10Q9BTT4 135 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 TEX13BQ9BXU2 312 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 MRPL4Q9BYD3 311 aaKnown RBP14.72□□□□□ -0.05
SDC2-201ENST00000302190 CEP41Q9BYV8 373 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 CISHQ9NSE2 258 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 RIPK3Q9Y572 518 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 UMODL1Q5DID0 1318 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 CCNE2O96020 404 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 KRT7P08729 469 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 CLCN3P51790 818 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 NRLP54845 237 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 MRPS9P82933 396 aaKnown RBP14.72□□□□□ -0.05
SDC2-201ENST00000302190 BTNL9Q6UXG8 535 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 ZNF572Q7Z3I7 529 aaPredicted RBP14.72□□□□□ -0.05
SDC2-201ENST00000302190 OTUD5Q96G74 571 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 THTPAQ9BU02 230 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 GPRC5DQ9NZD1 345 aa14.72□□□□□ -0.05
SDC2-201ENST00000302190 NCANO14594 1321 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 ASAP2O43150 1006 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 PGK2P07205 417 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 ITIH4Q14624 930 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 TATDN1Q6P1N9 297 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 C4orf19Q8IY42 314 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 PLEKHO2Q8TD55 490 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 RMDN2Q96LZ7 410 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 MYLK2Q9H1R3 596 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 SLC38A10Q9HBR0 1119 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 ANKEF1Q9NU02 776 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 PCYOX1Q9UHG3 505 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 MAST2Q6P0Q8 1798 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 TRIM49D1C9J1S8 452 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 MED7O43513 233 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 RASSF9O75901 435 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 PGM1P36871 562 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 GRAMD1BQ3KR37 738 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 KDELC2Q7Z4H8 507 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 SREK1Q8WXA9 508 aaKnown RBP14.71□□□□□ -0.05
SDC2-201ENST00000302190 FAM210AQ96ND0 272 aa14.71□□□□□ -0.05
SDC2-201ENST00000302190 ZC3H7BQ9UGR2 993 aaKnown RBP14.71□□□□□ -0.05
SDC2-201ENST00000302190 NUDT17P0C025 328 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 CHRNB2P17787 502 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 TRIM72Q6ZMU5 477 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 ABRAQ8N0Z2 381 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 SLC25A41Q8N5S1 370 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 TCP10LQ8TDR4 215 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 CCT6BQ92526 530 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 PAFAH2Q99487 392 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 TMEM59LQ9UK28 342 aa14.71□□□□□ -0.06
SDC2-201ENST00000302190 B2RBV5 119 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 ENTPD5O75356 428 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 STK10O94804 968 aaKnown RBP14.7□□□□□ -0.06
SDC2-201ENST00000302190 TNFSF9P41273 254 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 RANBP1P43487 201 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 EFTUD2Q15029 972 aaKnown RBP eCLIP14.7□□□□□ -0.065e-9■□□□□ 9.8
SDC2-201ENST00000302190 CCNG2Q16589 344 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 GLRA4Q5JXX5 417 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 IL31Q6EBC2 164 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 YTHDF3Q7Z739 585 aaKnown RBP14.7□□□□□ -0.06
SDC2-201ENST00000302190 CRLF3Q8IUI8 442 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 SPATA33Q96N06 139 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 SNX9Q9Y5X1 595 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 C2orf71A6NGG8 1288 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 ITGB3P05106 788 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 LCP1P13796 627 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 BGNP21810 368 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 ECHS1P30084 290 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 KLHL38Q2WGJ6 581 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 FER1L6Q2WGJ9 1857 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 TDRD10Q5VZ19 366 aaKnown RBP14.7□□□□□ -0.06
SDC2-201ENST00000302190 SPOCD1Q6ZMY3 1216 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 LRRC6Q86X45 466 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 POLIQ9UNA4 740 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 STXBP5LQ9Y2K9 1186 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 NUB1Q9Y5A7 615 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 H0YGN5 161 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 SLC26A4O43511 780 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 PYGBP11216 843 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 SDC4P31431 198 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 NR1H3Q13133 447 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 FITM2Q8N6M3 262 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 ZNF280CQ8ND82 737 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 LPAR1Q92633 364 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 ART4Q93070 314 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 ZDHHC18Q9NUE0 388 aa14.7□□□□□ -0.06
SDC2-201ENST00000302190 NFS1Q9Y697 457 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms