RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 MRGBPQ9NV56 204 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SNX8Q9Y5X2 465 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SLC30A1Q9Y6M5 507 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 CAPN6Q9Y6Q1 641 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 PVALEFA0A1B0GWK0 134 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 F8W810 466 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 TP73O15350 636 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 RBP3P10745 1247 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 NCALDP61601 193 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 GRAPQ13588 217 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 ALCAMQ13740 583 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 SHROOM1Q2M3G4 852 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 ANKS3Q6ZW76 656 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 KRT77Q7Z794 578 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
ABCA3-201ENST00000301732 GPR63Q9BZJ6 419 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
ABCA3-201ENST00000301732 CYP27B1O15528 508 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 ZBTB7AO95365 584 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 ASNSP08243 561 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 MLNP12872 115 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 ALOX12P18054 663 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 COILP38432 576 aaPredicted RBP12.83□□□□□ -0.35
ABCA3-201ENST00000301732 RFC5P40937 340 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 ABCG1P45844 678 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 GRM4Q14833 912 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 RCSD1Q6JBY9 416 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 GUF1Q8N442 669 aaKnown RBP12.83□□□□□ -0.35
ABCA3-201ENST00000301732 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.35
ABCA3-201ENST00000301732 DEPDC7Q96QD5 511 aa12.83□□□□□ -0.35
ABCA3-201ENST00000301732 TRIM45Q9H8W5 580 aaPredicted RBP12.83□□□□□ -0.35
ABCA3-201ENST00000301732 MTO1Q9Y2Z2 717 aaKnown RBP12.83□□□□□ -0.35
ABCA3-201ENST00000301732 NDUFB5O43674 189 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 SNRPAP09012 282 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 NRF1Q16656 503 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 CENPPQ6IPU0 288 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 SCUBE1Q8IWY4 988 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 PCYOX1LQ8NBM8 494 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 GPRASP2Q96D09 838 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ERP44Q9BS26 406 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 DGCR6LQ9BY27 220 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 KRT84Q9NSB2 600 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 GPRC5DQ9NZD1 345 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ITIH2P19823 946 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 CHI3L1P36222 383 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 PRIM2P49643 509 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 TNFAIP2Q03169 654 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 KLHL17Q6TDP4 642 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 NT5DC3Q86UY8 548 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 AK9Q5TCS8 1911 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ADGRL2O95490 1459 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ERI2A8K979 691 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 TPH1P17752 444 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ABCE1P61221 599 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 TPD52L3Q96J77 140 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 ZNF512Q96ME7 567 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 MAGEA13PA6NCF6 341 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 IREB2P48200 963 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 CDH24Q86UP0 819 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 LDHDQ86WU2 507 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 URGCPQ8TCY9 931 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 NELFEP18615 380 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 FIG4Q92562 907 aa12.83□□□□□ -0.36
ABCA3-201ENST00000301732 RBMX2Q9Y388 322 aaKnown RBP12.83□□□□□ -0.36
ABCA3-201ENST00000301732 PCNAP12004 261 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CLK2P49760 499 aaKnown RBP12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 SOX10P56693 466 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 GEMIN4P57678 1058 aaKnown RBP12.82□□□□□ -0.36
ABCA3-201ENST00000301732 DGCR6Q14129 220 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 MTHFD1LQ6UB35 978 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CASP10Q92851 521 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 ATP6V1G2O95670 118 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CALCAP01258 141 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 LTFP02788 710 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 MAGP20916 626 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 WLSQ5T9L3 541 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CENPLQ8N0S6 344 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-201ENST00000301732 ASAP3Q8TDY4 903 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-201ENST00000301732 TRIM39Q9HCM9 518 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 CD209Q9NNX6 404 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 ZMPSTE24O75844 475 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 KLHL2O95198 593 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 RIPOR1Q6ZS17 1223 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 LPCAT2Q7L5N7 544 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 FRMD5Q7Z6J6 570 aa12.82□□□□□ -0.36
ABCA3-201ENST00000301732 STK33Q9BYT3 514 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms