RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 XYLT1Q86Y38 959 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.42■□□□□ 0.22
LSM6-201ENST00000296581 LRRC1Q9BTT6 524 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 DNAI2Q9GZS0 605 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 DPEP3Q9H4B8 488 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 SIGLEC16A6NMB1 481 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 CCDC188H7C350 402 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 CYB561D2O14569 222 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 FGGP02679 453 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 LMO2P25791 158 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 RWDD2BP57060 319 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 GRIK3Q13003 919 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 ZNF211Q13398 564 aaPredicted RBP16.42■□□□□ 0.22
LSM6-201ENST00000296581 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 TTC30AQ86WT1 665 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 LINC01599Q8WXQ3 324 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 RUBCNQ92622 972 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 MCRS1Q96EZ8 462 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 MCEEQ96PE7 176 aa16.42■□□□□ 0.22
LSM6-201ENST00000296581 NAP1L3Q99457 506 aaPredicted RBP16.42■□□□□ 0.22
LSM6-201ENST00000296581 RRP15Q9Y3B9 282 aaKnown RBP16.42■□□□□ 0.22
LSM6-201ENST00000296581 GABRDO14764 452 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 HCRTO43612 131 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 IGFBP6P24592 240 aaPredicted RBP16.41■□□□□ 0.22
LSM6-201ENST00000296581 AARSP49588 968 aaKnown RBP eCLIP16.41■□□□□ 0.22
LSM6-201ENST00000296581 PSMC1P62191 440 aaKnown RBP16.41■□□□□ 0.22
LSM6-201ENST00000296581 VSNL1P62760 191 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 FAM189BP81408 668 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 BFSP2Q13515 415 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 UPP1Q16831 310 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 DCUN1D2Q6PH85 259 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 SENP8Q96LD8 212 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 RNF208Q9H0X6 261 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 CACNG4Q9UBN1 327 aa16.41■□□□□ 0.22
LSM6-201ENST00000296581 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
LSM6-201ENST00000296581 EOMESO95936 686 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 PYGMP11217 842 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 OGDHQ02218 1023 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 C8orf74Q6P047 294 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 SLC24A5Q71RS6 500 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 NIPA2Q8N8Q9 360 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 C3orf58Q8NDZ4 430 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 MIS12Q9H081 205 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 SYNCQ9H7C4 482 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 HESX1Q9UBX0 185 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 KRIT1O00522 736 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 PSTPIP1O43586 416 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 PDGFRBP09619 1106 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 MCM3P25205 808 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 SEL1L2Q5TEA6 688 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 FAM43BQ6ZT52 329 aaPredicted RBP16.4■□□□□ 0.22
LSM6-201ENST00000296581 FNIP1Q8TF40 1166 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 STK32AQ8WU08 396 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 SLC35F5Q8WV83 523 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 HNRNPLLQ8WVV9 542 aaKnown RBP16.4■□□□□ 0.22
LSM6-201ENST00000296581 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
LSM6-201ENST00000296581 TNIP3Q96KP6 325 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 AP1M1Q9BXS5 423 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 SLC4A5Q9BY07 1137 aa16.4■□□□□ 0.22
LSM6-201ENST00000296581 CASTOR2A6NHX0 329 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 GOLGA8SH3BPF8 625 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 POMCP01189 267 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 KRT3P12035 628 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 HSPA6P17066 643 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 TAS2R40P59535 323 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 GPS2Q13227 327 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 TUSC3Q13454 348 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 PIGHQ14442 188 aaPredicted RBP16.39■□□□□ 0.21
LSM6-201ENST00000296581 TTC31Q49AM3 519 aaPredicted RBP16.39■□□□□ 0.21
LSM6-201ENST00000296581 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 AADACL2Q6P093 401 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 RHOT1Q8IXI2 618 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 TMEM86AQ8N2M4 240 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 KRT12Q99456 494 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 LPIN3Q9BQK8 851 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
LSM6-201ENST00000296581 CAPN15O75808 1086 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
LSM6-201ENST00000296581 PAX3P23760 479 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 RFC1P35251 1148 aaPredicted RBP16.39■□□□□ 0.21
LSM6-201ENST00000296581 GPNMBQ14956 572 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 CC2D1AQ6P1N0 951 aaPredicted RBP16.39■□□□□ 0.21
LSM6-201ENST00000296581 ANKRD52Q8NB46 1076 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 HDAC7Q8WUI4 952 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 UROC1Q96N76 676 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 PAAF1Q9BRP4 392 aa16.39■□□□□ 0.21
LSM6-201ENST00000296581 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
LSM6-201ENST00000296581 TSC2P49815 1807 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 NBNO60934 754 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 PMF1Q6P1K2 205 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 TMCO3Q6UWJ1 677 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 TMEM110Q86TL2 294 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 PACS2Q86VP3 889 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 B3GALNT2Q8NCR0 500 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms