RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 KIZQ2M2Z5 673 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 LRRC6Q86X45 466 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 FAM131BQ86XD5 332 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 SLC25A41Q8N5S1 370 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
TGFA-201ENST00000295400 RXFP2Q8WXD0 754 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 MAGEB18Q96M61 343 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 A1CFQ9NQ94 594 aaKnown RBP12.12□□□□□ -0.47
TGFA-201ENST00000295400 NDE1Q9NXR1 346 aa12.12□□□□□ -0.47
TGFA-201ENST00000295400 SNRPAP09012 282 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 CTSHP09668 335 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 EPHB2P29323 1055 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 RPA3P35244 121 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 MARSP56192 900 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 ITIH4Q14624 930 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 RCN1Q15293 331 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 ISLR2Q6UXK2 745 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 PRPF39Q86UA1 669 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 AGGF1Q8N302 714 aaeCLIP12.11□□□□□ -0.47
TGFA-201ENST00000295400 CEP120Q8N960 986 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 ASAP3Q8TDY4 903 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 AP5M1Q9H0R1 490 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 A0A087WZ62 844 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 SNX3O60493 162 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 NAMPTP43490 491 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
TGFA-201ENST00000295400 CES3Q6UWW8 571 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 CDKL3Q8IVW4 592 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 FDXACB1Q9BRP7 624 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 CCDC68Q9H2F9 335 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 RSAD1Q9HA92 442 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 FAM53CQ9NYF3 392 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 ADA2Q9NZK5 511 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 DFFAO00273 331 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 AIM2O14862 343 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 FSBPO95073 299 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 SULT1E1P49888 294 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 AP3M2P53677 418 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 IER5Q5VY09 327 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 NPNTQ6UXI9 565 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 ZCCHC23Q6ZST2 131 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 OR6P1Q8NGX9 317 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 WWP1Q9H0M0 922 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
TGFA-201ENST00000295400 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
TGFA-201ENST00000295400 CCNE2O96020 404 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 ELF3P78545 371 aaPredicted RBP12.1□□□□□ -0.47
TGFA-201ENST00000295400 GTF2BQ00403 316 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 EML3Q32P44 896 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 ZBTB41Q5SVQ8 909 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 TMEM154Q6P9G4 183 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 AGBL3Q8NEM8 1001 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 MTBPQ96DY7 904 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 LRGUKQ96M69 825 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
TGFA-201ENST00000295400 SNRPFP62306 86 aaKnown RBP12.1□□□□□ -0.47
TGFA-201ENST00000295400 GCNT1Q02742 428 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 LAMTOR4Q0VGL1 99 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 MAMLD1Q13495 774 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 MYBPC2Q14324 1141 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 GABPB2Q8TAK5 448 aaPredicted RBP12.1□□□□□ -0.47
TGFA-201ENST00000295400 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 SMARCAD1Q9H4L7 1026 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 WDR35Q9P2L0 1181 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 DNM1LO00429 736 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 BNIP3LO60238 219 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 MX2P20592 715 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 PDE1CQ14123 709 aaPredicted RBP12.1□□□□□ -0.47
TGFA-201ENST00000295400 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 TRIM67Q6ZTA4 783 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 FAM172AQ8WUF8 416 aa12.1□□□□□ -0.47
TGFA-201ENST00000295400 MYLK2Q9H1R3 596 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms