RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 XRCC4Q13426 336 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 KCTD2Q14681 263 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 MORF4L2Q15014 288 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 SMTNL2Q2TAL5 461 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 CYB5D1Q6P9G0 228 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 EXOC8Q8IYI6 725 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 ARFGAP1Q8N6T3 406 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 MAML1Q92585 1016 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 MMP19Q99542 508 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 MINDY3Q9H8M7 445 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 SAE1Q9UBE0 346 aaPredicted RBP15.86■□□□□ 0.13
CCDC116-201ENST00000292779 SLC12A4Q9UP95 1085 aa15.86■□□□□ 0.13
CCDC116-201ENST00000292779 USP15Q9Y4E8 981 aaPredicted RBP15.86■□□□□ 0.13
CCDC116-201ENST00000292779 DNAJC25-GNG10A0A024R161 153 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 IFNB1P01574 187 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 KRT3P12035 628 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 STX2P32856 288 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CDH8P55286 799 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 DYNLT1P63172 113 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 SLC25A11Q02978 314 aaKnown RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 KCNT1Q5JUK3 1230 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 RNASEH2BQ5TBB1 312 aaKnown RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 EFCAB12Q6NXP0 572 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 ARHGEF18Q6ZSZ5 1173 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 POLNQ7Z5Q5 900 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 RIBC1Q8N443 379 aaPredicted RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 TGS1Q96RS0 853 aaKnown RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CDT1Q9H211 546 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 PDGFCQ9NRA1 345 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 NKIRAS1Q9NYS0 192 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 ACTL7BQ9Y614 415 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CCL15-CCL14A0A0B4J2E2 113 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 SIGLEC16A6NMB1 481 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 LRCH4O75427 683 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 IQCF3P0C7M6 154 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 TXNP10599 105 aaKnown RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 IL1R2P27930 398 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 POLR2BP30876 1174 aaKnown RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 TFDP1Q14186 410 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 ZKSCAN8Q15776 578 aaPredicted RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CCL15Q16663 113 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CCDC142Q17RM4 750 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 FAM133BQ5BKY9 247 aaKnown RBP15.85■□□□□ 0.13
CCDC116-201ENST00000292779 CAPN12Q6ZSI9 719 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 KIAA0319LQ8IZA0 1049 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 SLC35B2Q8TB61 432 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 TTC25Q96NG3 672 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 SDCBP2Q9H190 292 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 LHX5Q9H2C1 402 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 PCDH9Q9HC56 1237 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 SIX4Q9UIU6 781 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 GGT7Q9UJ14 662 aa15.85■□□□□ 0.13
CCDC116-201ENST00000292779 DOCK3Q8IZD9 2030 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 MED7O43513 233 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 GSTA1P08263 222 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 RAD23BP54727 409 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 PSMC1P62191 440 aaKnown RBP15.84■□□□□ 0.13
CCDC116-201ENST00000292779 FKBP1BP68106 108 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 MBTD1Q05BQ5 628 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 ZNF667Q5HYK9 610 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 ZBED8Q8IZ13 594 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 SGSM3Q96HU1 749 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 CPXM1Q96SM3 734 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 BCO2Q9BYV7 579 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 C10orf88Q9H8K7 445 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 RPF1Q9H9Y2 349 aaKnown RBP15.84■□□□□ 0.13
CCDC116-201ENST00000292779 POC1B-GALNT4F8VUJ3 575 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 PDHXO00330 501 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 CSDE1O75534 798 aaKnown RBP15.84■□□□□ 0.13
CCDC116-201ENST00000292779 SUN1O94901 812 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 NFICP08651 508 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 OTUD4Q01804 1114 aaKnown RBP15.84■□□□□ 0.13
CCDC116-201ENST00000292779 FASTKD5Q7L8L6 764 aaKnown RBP15.84■□□□□ 0.13
CCDC116-201ENST00000292779 TRABD2AQ86V40 505 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 EMC1Q8N766 993 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 ACTL9Q8TC94 416 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 PRCCQ92733 491 aaPredicted RBP15.84■□□□□ 0.13
CCDC116-201ENST00000292779 MAGEB18Q96M61 343 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 ZIC5Q96T25 663 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 RNPEPQ9H4A4 650 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 SMARCAD1Q9H4L7 1026 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 VPS37BQ9H9H4 285 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 SHOC2Q9UQ13 582 aa15.84■□□□□ 0.13
CCDC116-201ENST00000292779 GOLGA8MH3BSY2 632 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 GPR25O00155 361 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 ALOX15BO15296 676 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 CST8O60676 142 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 KRT7P08729 469 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 GTF2A1P52655 376 aaPredicted RBP15.83■□□□□ 0.13
CCDC116-201ENST00000292779 IGBP1P78318 339 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 PDIA2Q13087 525 aaKnown RBP15.83■□□□□ 0.13
CCDC116-201ENST00000292779 PPP1R21Q6ZMI0 780 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 SPATA21Q7Z572 469 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 XYLT1Q86Y38 959 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 PARP9Q8IXQ6 854 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 C1orf127Q8N9H9 656 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 TWNKQ96RR1 684 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.13
CCDC116-201ENST00000292779 SYNCQ9H7C4 482 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms