RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 UCHL3P15374 230 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 C4BPBP20851 252 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 NMT1P30419 496 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 OTUD4Q01804 1114 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 CACNB2Q08289 660 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIP4Q15650 581 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 PLEKHA7Q6IQ23 1121 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 FGD2Q7Z6J4 655 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 RIBC1Q8N443 379 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 NMD3Q96D46 503 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ECSITQ9BQ95 431 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 CACNA2D2Q9NY47 1150 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 HERC5Q9UII4 1024 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 PSMC3P17980 439 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 PSMC5P62195 406 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 STX5Q13190 355 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ADCK2Q7Z695 626 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 GLMNQ92990 594 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 BARHL2Q9NY43 387 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ATXN10Q9UBB4 475 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 APEX2Q9UBZ4 518 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 WDR19Q8NEZ3 1342 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 PSMD14O00487 310 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 CAPZA2P47755 286 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 AP3M2P53677 418 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 BNIPLQ7Z465 357 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 TC2NQ8N9U0 490 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC44A5Q8NCS7 719 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 KCNB2Q92953 911 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 HEY2Q9UBP5 337 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 HAO1Q9UJM8 370 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ZMYND8Q9ULU4 1186 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ADGRA2Q96PE1 1338 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SUPT3HB4E1H0 165 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 PSMA4P25789 261 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 CACNB3P54284 484 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 GRIK3Q13003 919 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIM25Q14258 630 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 NAB2Q15742 525 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SGO1Q5FBB7 561 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 MROH9Q5TGP6 573 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 OLFML1Q6UWY5 402 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SP8Q8IXZ3 490 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ADSSL1Q8N142 457 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 GIMAP8Q8ND71 665 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 HES6Q96HZ4 224 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 RIC8BQ9NVN3 520 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 CD274Q9NZQ7 290 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 PIM2Q9P1W9 311 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 TMCO1Q9UM00 188 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC30A1Q9Y6M5 507 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 IRF6O14896 467 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF23P17027 643 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 GPSM2P81274 684 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 LAMC2Q13753 1193 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 GPR162Q16538 588 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 NLRP9Q7RTR0 991 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 MMGT1Q8N4V1 131 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 RAB42Q8N4Z0 105 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 RBM46Q8TBY0 533 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 KIF12Q96FN5 646 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 SMAD5Q99717 465 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 PAK5Q9P286 719 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 WDR35Q9P2L0 1181 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 TJP2Q9UDY2 1190 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 DLG5Q8TDM6 1919 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 ITIH6Q6UXX5 1313 aa11.17□□□□□ -0.62
PKNOX1-201ENST00000291547 CLPTM1O96005 669 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 MYL3P08590 195 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 RBP3P10745 1247 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 OASLQ15646 514 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 TTC39BQ5VTQ0 682 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 CHMP1BQ7LBR1 199 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 VPS37AQ8NEZ2 397 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ASZ1Q8WWH4 475 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 MTA3Q9BTC8 594 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 THUMPD3Q9BV44 507 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 RERGLQ9H628 205 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF839A8K0R7 811 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIM49D1C9J1S8 452 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 DPYSL4O14531 572 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PSMD3O43242 534 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 POLBP06746 335 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 COMTP21964 271 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms