RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 SMG9Q9H0W8 520 aaKnown RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 GANQ9H2C0 597 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 PCDHB12Q9Y5F1 795 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 COL1A2P08123 1366 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 RIF1Q5UIP0 2472 aaKnown RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 ATG2BQ96BY7 2078 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 H0YGN5 161 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 TRAPPC3O43617 180 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 MICAL2O94851 1124 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 KCNT2Q6UVM3 1135 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 C18orf8Q96DM3 657 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 COLEC11Q9BWP8 271 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 SMIM23A6NLE4 172 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 ZNF263O14978 683 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 ADAM12O43184 909 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 MSI1O43347 362 aaKnown RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 EFEMP1Q12805 493 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 ELOA2Q8IYF1 753 aaPredicted RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 LNX1Q8TBB1 728 aaPredicted RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 EPS8L1Q8TE68 723 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 RNF139Q8WU17 664 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 RSPH1Q8WYR4 309 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 PIWIL1Q96J94 861 aaKnown RBP14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 CFAP57Q96MR6 1250 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 ADAM33Q9BZ11 813 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 MAGEB5Q9BZ81 275 aa14.89□□□□□ -0.03
LRRFIP1-202ENST00000289175 KRT3P12035 628 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 KRT10P13645 584 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 MAGEA10P43363 369 aaPredicted RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 TKTL1P51854 596 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 CCSAPQ6IQ19 270 aaPredicted RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 ZNF564Q8TBZ8 553 aaPredicted RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 LINC01599Q8WXQ3 324 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 SFMBT1Q9UHJ3 866 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 TRIOO75962 3097 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 A0A1W2PQC6 194 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 RFPL2O75678 378 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 BEST1O76090 585 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 ATP1A1P05023 1023 aaKnown RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 ODC1P11926 461 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 PTPN1P18031 435 aaKnown RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 RPS6KA1Q15418 735 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 RAB6CQ53S08 254 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 KLHL23Q8NBE8 558 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 CCNYQ8ND76 341 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 ZNF558Q96NG5 402 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 CORO1BQ9BR76 489 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 RAB6CQ9H0N0 254 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 DHX35Q9H5Z1 703 aaKnown RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 SNX10Q9Y5X0 201 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 LOC102724159A0A0B4J2E5 919 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 CCL16O15467 120 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 TSPAN3O60637 253 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 PWP2Q15269 919 aaKnown RBP14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 RTP2Q5QGT7 225 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 FUT10Q6P4F1 479 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 GDPD5Q8WTR4 605 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 MYLPFQ96A32 169 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 TCF25Q9BQ70 676 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 SIX2Q9NPC8 291 aa14.88□□□□□ -0.03
LRRFIP1-202ENST00000289175 FAM200BP0CF97 657 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 PPP2R2DQ66LE6 453 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 PIGZQ86VD9 579 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 SLC22A17Q8WUG5 538 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 MTIF3Q9H2K0 278 aaKnown RBP14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 FAM204AQ9H8W3 233 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 SALL4Q9UJQ4 1053 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 GVINP1Q7Z2Y8 2422 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 ESYT3A0FGR9 886 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 YWHAEP62258 255 aaKnown RBP14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 KRT81Q14533 505 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 C10orf120Q5SQS8 335 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 VARS2Q5ST30 1063 aaKnown RBP14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 ZC3H18Q86VM9 953 aaKnown RBP14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 B3GALNT2Q8NCR0 500 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 PCED1BQ96HM7 432 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 TNIP3Q96KP6 325 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 ULBP1Q9BZM6 244 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 ZDHHC4Q9NPG8 344 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 ADAM28Q9UKQ2 775 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 COL6A3P12111 3177 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 LRRC10BA6NIK2 292 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 RNF8O76064 485 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 CKMP06732 381 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 PAFAH1B1P43034 410 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 PTPRFP10586 1907 aa14.87□□□□□ -0.03
LRRFIP1-202ENST00000289175 O00370 1275 aa14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 GTF2F1P35269 517 aaKnown RBP eCLIP14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 C2orf54Q08AI8 447 aa14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 PMF1Q6P1K2 205 aa14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 C1orf228Q6PIY5 440 aa14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 PRUNE1Q86TP1 453 aa14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 NPAS4Q8IUM7 802 aa14.86□□□□□ -0.03
LRRFIP1-202ENST00000289175 CPXM1Q96SM3 734 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms