RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PAFAH2Q99487 392 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 ASNSD1Q9NWL6 643 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 ATRNL1Q5VV63 1379 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 CAPN9O14815 690 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 CREB3O43889 395 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 NUMBP49757 651 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 TAF5Q15542 800 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 YTHDF3Q7Z739 585 aaKnown RBP16.66■□□□□ 0.26
SMAD6-201ENST00000288840 PAF1Q8N7H5 531 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 ATXN2LQ8WWM7 1075 aaKnown RBP16.66■□□□□ 0.26
SMAD6-201ENST00000288840 MED10Q9BTT4 135 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 PORCNQ9H237 461 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 SDC4P31431 198 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 EFNA5P52803 228 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 ITIH4Q14624 930 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 HSDL1Q3SXM5 330 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 MYPNQ86TC9 1320 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 C12orf56Q8IXR9 622 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 PPFIBP2Q8ND30 876 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 AGAP11Q8TF27 550 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 SLITRK1Q96PX8 696 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 FERMT1Q9BQL6 677 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 AVENQ9NQS1 362 aaPredicted RBP16.66■□□□□ 0.26
SMAD6-201ENST00000288840 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 IQANK1A0A1B0GTG1 560 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 CFAP73A6NFT4 308 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 ADCY3O60266 1144 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 ZC3H11AO75152 810 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMAD6-201ENST00000288840 KRT16P08779 473 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 VCPP55072 806 aaKnown RBP16.66■□□□□ 0.26
SMAD6-201ENST00000288840 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 ACOT1Q86TX2 421 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
SMAD6-201ENST00000288840 A0A087WZ62 844 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 LIASO43766 372 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 DCTN3O75935 186 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 HAUS5O94927 633 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 VNN1O95497 513 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 CETPP11597 493 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 MPP2Q14168 576 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 SUGP1Q8IWZ8 645 aaKnown RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 FITM2Q8N6M3 262 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TCP10LQ8TDR4 215 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 FDXACB1Q9BRP7 624 aaPredicted RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 SMYD3Q9H7B4 428 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 DDX56Q9NY93 547 aaKnown RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TXNDC9O14530 226 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 UNGP13051 313 aaPredicted RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 CATSPER4Q7RTX7 472 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 DEPDC1BQ8WUY9 529 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TFAP2BQ92481 460 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 MAGEB18Q96M61 343 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 MYLK2Q9H1R3 596 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 PCMTD2Q9NV79 361 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 UPP2O95045 317 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 FDX1P10109 184 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 ELK3P41970 407 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 GEMIN4P57678 1058 aaKnown RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TAF1BQ53T94 588 aaPredicted RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 DNAAF3Q8N9W5 541 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TTC13Q8NBP0 860 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 HPDLQ96IR7 371 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TSSK1BQ9BXA7 367 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 KLK14Q9P0G3 267 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 HEY2Q9UBP5 337 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 ZC3H7BQ9UGR2 993 aaKnown RBP16.65■□□□□ 0.26
SMAD6-201ENST00000288840 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
SMAD6-201ENST00000288840 TRIM49D1C9J1S8 452 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 ABHD15Q6UXT9 468 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 ARMCX1Q9P291 453 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 LYPLA2O95372 231 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 ENO1P06733 434 aaKnown RBP16.64■□□□□ 0.25
SMAD6-201ENST00000288840 MIPP30301 263 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 NME3Q13232 169 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 MON1BQ7L1V2 547 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 NLRP9Q7RTR0 991 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 LRRC6Q86X45 466 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 SCUBE3Q8IX30 993 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 C12orf29Q8N999 325 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 C3orf20Q8ND61 904 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 USP18Q9UMW8 372 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 A8MXQ7 604 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 TBC1D12O60347 775 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 PYGBP11216 843 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 EPHB2P29323 1055 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 TSNAXIP1Q2TAA8 658 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 VSTM1Q6UX27 236 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 PPIL6Q8IXY8 311 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 TRPM4Q8TD43 1214 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 RXFP2Q8WXD0 754 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 CCDC124Q96CT7 223 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms