RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HUS1O60921 280 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SOAT2O75908 522 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 HLA-DRAP01903 254 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 RHOP08100 348 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 KRT19P08727 400 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TRIM49P0CI25 452 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TRIM49CP0CI26 452 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 PTPN2P17706 415 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 ACAT1P24752 427 aaKnown RBP9.81□□□□□ -0.84
HMGN1-201ENST00000288344 PPP1R2P41236 205 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 ASPAP45381 313 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 GCLMP48507 274 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 ARPP19P56211 112 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TWF1Q12792 350 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 MYO1EQ12965 1108 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CBWD6Q4V339 395 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SLC39A12Q504Y0 691 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CBWD3Q5JTY5 395 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CBWD5Q5RIA9 395 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 LIN9Q5TKA1 542 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 DPY19L2P1Q6NXN4 242 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 GAREM2Q75VX8 874 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 OTOP3Q7RTS5 596 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 FRMD5Q7Z6J6 570 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 DNAJB7Q7Z6W7 309 aaPredicted RBP9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TRIM59Q8IWR1 403 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 NPAS3Q8IXF0 933 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 ADGRF2Q8IZF7 708 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 THEM5Q8N1Q8 247 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SPPL2BQ8TCT7 592 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 NOC3LQ8WTT2 800 aaKnown RBP9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TAF4BQ92750 862 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 FGF13Q92913 245 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 PSMG2Q969U7 264 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SYAP1Q96A49 352 aaPredicted RBP9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TCEAL4Q96EI5 215 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 MYRFLQ96LU7 910 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 ZSWIM3Q96MP5 696 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 LPIN3Q9BQK8 851 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SMOC2Q9H3U7 446 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 KCNK12Q9HB15 430 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 TMEM8AQ9HCN3 771 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 ABCB6Q9NP58 842 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 GTF3C4Q9UKN8 822 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CDH7Q9ULB5 785 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 NR2E1Q9Y466 385 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SHISA7A6NL88 538 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 DCXO43602 365 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 XYLBO75191 536 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 F11P03951 625 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 CPB1P15086 417 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 FSHRP23945 695 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 FCARP24071 287 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 CYP2F1P24903 491 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 WEE1P30291 646 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 GNL1P36915 607 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-201ENST00000288344 MAGEA11P43364 429 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 TUFMP49411 452 aaKnown RBP9.8□□□□□ -0.84
HMGN1-201ENST00000288344 ZXDAP98168 799 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 INCA1Q0VD86 236 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 HTR4Q13639 388 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 PTPN21Q16825 1174 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 SPOPLQ6IQ16 392 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 ELMSAN1Q6PJG2 1045 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 BMP8AQ7Z5Y6 402 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 METTL23Q86XA0 190 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 SLC44A3Q8N4M1 653 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 UBR7Q8N806 425 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 MYCBPAPQ8TBZ2 947 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 NELFBQ8WX92 580 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 FGF14Q92915 247 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 FUBP3Q96I24 572 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGN1-201ENST00000288344 PI4K2AQ9BTU6 479 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 DPEP3Q9H4B8 488 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 SMYD3Q9H7B4 428 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 TRPV4Q9HBA0 871 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 ZNF334Q9HCZ1 680 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-201ENST00000288344 IL37Q9NZH6 218 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 ASB3Q9Y575 518 aa9.8□□□□□ -0.84
HMGN1-201ENST00000288344 ZFP37Q9Y6Q3 630 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-201ENST00000288344 ANAPC1Q9H1A4 1944 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 F5P12259 2224 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 NCANO14594 1321 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PRRG1O14668 218 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PSMA7O14818 248 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 ASGR2P07307 311 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PDGFRBP09619 1106 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 ALADP13716 330 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PTPN1P18031 435 aaKnown RBP9.79□□□□□ -0.84
HMGN1-201ENST00000288344 ELF1P32519 619 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 CACNA2D1P54289 1103 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 NFE2Q16621 373 aaPredicted RBP9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PABPC1LQ4VXU2 614 aaKnown RBP9.79□□□□□ -0.84
HMGN1-201ENST00000288344 KRT39Q6A163 491 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PARM1Q6UWI2 310 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 DCP1BQ8IZD4 617 aaKnown RBP9.79□□□□□ -0.84
HMGN1-201ENST00000288344 MLKLQ8NB16 471 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 SHKBP1Q8TBC3 707 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms