RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FAM170AA1A519 330 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TMEM150BA6NC51 233 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 C2CD2LO14523 706 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 CCDC22O60826 627 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 STAM2O75886 525 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 LDHAP00338 332 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 CALB1P05937 261 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 CXCL9Q07325 125 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 RCN1Q15293 331 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TMED2Q15363 201 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TRIP13Q15645 432 aaPredicted RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 GSTA3Q16772 222 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 LRRC74BQ6ZQY2 392 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 ZC3H18Q86VM9 953 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 PHC3Q8NDX5 983 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 GATA6Q92908 595 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 ALKBH8Q96BT7 664 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 C9orf72Q96LT7 481 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 SMC6Q96SB8 1091 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 CGRRF1Q99675 332 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TMEM39BQ9GZU3 492 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 SLCO1B3Q9NPD5 702 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 XPNPEP1Q9NQW7 623 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 MYH9P35579 1960 aaKnown RBP10.9□□□□□ -0.67
SKA1-201ENST00000285116 E7ESA3 106 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 CCND2P30279 289 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PSMC4P43686 418 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 RPS6P62753 249 aaKnown RBP10.89□□□□□ -0.67
SKA1-201ENST00000285116 KPNB1Q14974 876 aaKnown RBP10.89□□□□□ -0.67
SKA1-201ENST00000285116 CENPUQ71F23 418 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 VSIG10LQ86VR7 867 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 SLC35B2Q8TB61 432 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PTPRN2Q92932 1015 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 FAM213AQ9BRX8 229 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PI4K2AQ9BTU6 479 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 SAYSD1Q9NPB0 183 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PKD2L1Q9P0L9 805 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 hCG_1818297A0A087WSY0 165 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 TM9SF1O15321 606 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 TLR3O15455 904 aaKnown RBP10.89□□□□□ -0.67
SKA1-201ENST00000285116 ZNF862O60290 1169 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PSAPP07602 524 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 KCNA2P16389 499 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 GNA15P30679 374 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PIK3CAP42336 1068 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 AP1B1Q10567 949 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PIGHQ14442 188 aaPredicted RBP10.89□□□□□ -0.67
SKA1-201ENST00000285116 FAM91A1Q658Y4 838 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 SPOCD1Q6ZMY3 1216 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 NLRP9Q7RTR0 991 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 NRG4Q8WWG1 115 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PWWP2AQ96N64 755 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 MIPEPQ99797 713 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 KIFC3Q9BVG8 833 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 HEMGNQ9BXL5 484 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 CADM1Q9BY67 442 aaKnown RBP10.89□□□□□ -0.67
SKA1-201ENST00000285116 GLIS2Q9BZE0 524 aaPredicted RBP10.89□□□□□ -0.67
SKA1-201ENST00000285116 ZNF408Q9H9D4 720 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 LCTP09848 1927 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 PHIPQ8WWQ0 1821 aa10.89□□□□□ -0.67
SKA1-201ENST00000285116 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 ATP2A1O14983 1001 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 SPAG7O75391 227 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 FYB2Q5VWT5 728 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CLNKQ7Z7G1 428 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CDHR1Q96JP9 859 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 NR1H4Q96RI1 486 aaPredicted RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 FNBP1Q96RU3 617 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 C11orf70Q9BRQ4 267 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 BTBD10Q9BSF8 475 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 VCX3BQ9H321 246 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 SYNCQ9H7C4 482 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 VCX3AQ9NNX9 186 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 DNPEPQ9ULA0 475 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 A0A1B0GVG6 124 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 GSTTP1A0A1W2PQM5 241 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CAPN9O14815 690 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 MAP3K7O43318 606 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 PSMG1O95456 288 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 PYGLP06737 847 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 OAZ1P54368 228 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 ZNF252P-AS1Q0IIN9 211 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 TFDP3Q5H9I0 405 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 ADGRD1Q6QNK2 874 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 GSTA5Q7RTV2 222 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 MZB1Q8WU39 189 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 RMDN3Q96TC7 470 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms