RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 MYL12AP19105 171 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 GRK4P32298 578 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 DMPKQ09013 629 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 STK39Q9UEW8 545 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 GRID1Q9ULK0 1009 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 A0A1W2PQC6 194 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 TRIM49BA6NDI0 452 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 POTECB2RU33 542 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 WARSP23381 471 aaKnown RBP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 RBP5P82980 135 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 ZRANB3Q5FWF4 1079 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
NIPBL-201ENST00000282516 S100A13Q99584 98 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 MYH6P13533 1939 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 KRT34O76011 436 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 TGM2P21980 687 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 PRCPP42785 496 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 MACC1Q6ZN28 852 aa9.06□□□□□ -0.96
NIPBL-201ENST00000282516 CROCC2H7BZ55 1655 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 BCL10O95999 233 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ATP6V1B2P21281 511 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SOX11P35716 441 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 OASLQ15646 514 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ESRP1Q6NXG1 681 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 TAF2Q6P1X5 1199 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 C2orf69Q8N8R5 385 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 KCTD14Q9BQ13 255 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 LSP1P33241 339 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 GPC1P35052 558 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 OTUD4Q01804 1114 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CDH18Q13634 790 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 LONRF1Q17RB8 773 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CYP4A22Q5TCH4 519 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 C4orf33Q8N1A6 199 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SPATA4Q8NEY3 305 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 UBASH3BQ8TF42 649 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 DYNLL2Q96FJ2 89 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PCSK1P29120 753 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 GEMIN4P57678 1058 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CENPCQ03188 943 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PFKFB3Q16875 520 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SEPT1Q8WYJ6 367 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 GOLPH3Q9H4A6 298 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 GABBR1Q9UBS5 961 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 EXTL3O43909 919 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CCT3P49368 545 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CASP12Q6UXS9 341 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SVOPQ8N4V2 548 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 OSCP1Q8WVF1 389 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 AGPAT1Q99943 283 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PSMD12O00232 456 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF24P17028 368 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PTPN7P35236 360 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 DCTN2Q13561 401 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ARHGAP15Q53QZ3 475 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 AGAP3Q96P47 875 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ATAD3AQ9NVI7 634 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PCDHGA4Q9Y5G9 962 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PBRM1Q86U86 1689 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CNPP09543 421 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 DPYDQ12882 1025 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 NAPEPLDQ6IQ20 393 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SLC20A1Q8WUM9 679 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 E2F7Q96AV8 911 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ROGDIQ9GZN7 287 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SIK3Q9Y2K2 1263 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 PHF20L1A8MW92 1017 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CD2BP2O95400 341 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CYP21A2P08686 494 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 AKR1B1P15121 316 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 CRKP46108 304 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 HARS2P49590 506 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 AMACRQ9UHK6 382 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 RAD17O75943 681 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 UQCRBP14927 111 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 STK33Q9BYT3 514 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 LIMA1Q9UHB6 759 aaKnown RBP9.05□□□□□ -0.96
NIPBL-201ENST00000282516 ANKARQ7Z5J8 1434 aa9.05□□□□□ -0.96
NIPBL-201ENST00000282516 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 ZBTB39O15060 712 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 ABCB1P08183 1280 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF57Q68EA5 555 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-201ENST00000282516 BNIPLQ7Z465 357 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 DHX40Q8IX18 779 aaKnown RBP9.04□□□□□ -0.96
NIPBL-201ENST00000282516 SETD9Q8NE22 299 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 INTS13Q9NVM9 706 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 KLHL28Q9NXS3 571 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 KCND2Q9NZV8 630 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 MGAT4DA6NG13 374 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 MEI4A8MW99 385 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 DYNC1LI2O43237 492 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-201ENST00000282516 CLPTM1O96005 669 aa9.04□□□□□ -0.96
NIPBL-201ENST00000282516 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms