RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FSCN2O14926 492 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 MED7O43513 233 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 P4HA1P13674 534 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 KCNE1P15382 129 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 CYP3A5P20815 502 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 INCA1Q0VD86 236 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 GPS2Q13227 327 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 LRRC26Q2I0M4 334 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 MRPL10Q7Z7H8 261 aaKnown RBP22.15■■□□□ 1.14
YBX3-202ENST00000279550 MAGOHBQ96A72 148 aaKnown RBP22.15■■□□□ 1.14
YBX3-202ENST00000279550 MCEEQ96PE7 176 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 TSPAN18Q96SJ8 248 aa22.15■■□□□ 1.14
YBX3-202ENST00000279550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.15■■□□□ 1.14
YBX3-202ENST00000279550 SMIM28A0A1B0GU29 152 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 MICAL2O94851 1124 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 TCF4P15884 667 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 MAN1A1P33908 653 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 GGCXP38435 758 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 NDST1P52848 882 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 GYS2P54840 703 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 FAM193AP78312 1265 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 HLTFQ14527 1009 aaKnown RBP eCLIP22.14■■□□□ 1.14
YBX3-202ENST00000279550 PPP2R5EQ16537 467 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 CYP1B1Q16678 543 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 PLEKHG4Q58EX7 1191 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 JAMLQ86YT9 394 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 EIF1ADQ8N9N8 165 aaKnown RBP22.14■■□□□ 1.14
YBX3-202ENST00000279550 RIN2Q8WYP3 895 aaPredicted RBP22.14■■□□□ 1.14
YBX3-202ENST00000279550 PPP1R12CQ9BZL4 782 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 RGS18Q9NS28 235 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 IP6K2Q9UHH9 426 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 TBX21Q9UL17 535 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 CEP83Q9Y592 693 aa22.14■■□□□ 1.14
YBX3-202ENST00000279550 KIAA0100Q14667 2235 aaKnown RBP22.14■■□□□ 1.14
YBX3-202ENST00000279550 SKIP12755 728 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 ATF7P17544 494 aaPredicted RBP22.14■■□□□ 1.13
YBX3-202ENST00000279550 CHRNA3P32297 505 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 DUPD1Q68J44 220 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 AGMOQ6ZNB7 445 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 LPPQ93052 612 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 ZFP42Q96MM3 310 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 FTHL17Q9BXU8 183 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 TRIM31Q9BZY9 425 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 BARX2Q9UMQ3 279 aaPredicted RBP22.14■■□□□ 1.13
YBX3-202ENST00000279550 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.14■■□□□ 1.13
YBX3-202ENST00000279550 FAN1Q9Y2M0 1017 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 GIT1Q9Y2X7 761 aa22.14■■□□□ 1.13
YBX3-202ENST00000279550 SCN1AP35498 2009 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 PDCD11Q14690 1871 aaKnown RBP22.13■■□□□ 1.13
YBX3-202ENST00000279550 FAM187AA6NFU0 413 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 PSTPIP1O43586 416 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 GJC1P36383 396 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 MLH1P40692 756 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 DHX34Q14147 1143 aaKnown RBP22.13■■□□□ 1.13
YBX3-202ENST00000279550 RTN4RL1Q86UN2 441 aaPredicted RBP22.13■■□□□ 1.13
YBX3-202ENST00000279550 RHOT1Q8IXI2 618 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 MREGQ8N565 214 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 BEST2Q8NFU1 509 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.13■■□□□ 1.13
YBX3-202ENST00000279550 LINC01599Q8WXQ3 324 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 SCLYQ96I15 445 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 CPXM1Q96SM3 734 aa22.13■■□□□ 1.13
YBX3-202ENST00000279550 MRPL45Q9BRJ2 306 aaKnown RBP22.13■■□□□ 1.13
YBX3-202ENST00000279550 UBQLN1Q9UMX0 589 aaKnown RBP22.13■■□□□ 1.13
YBX3-202ENST00000279550 GOLGA8SH3BPF8 625 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 PTGESO14684 152 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 PARNO95453 639 aaKnown RBP22.12■■□□□ 1.13
YBX3-202ENST00000279550 ERBB2P04626 1255 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 CLTBP09497 229 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 VDRP11473 427 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 CYP2C18P33260 490 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 COILP38432 576 aaPredicted RBP22.12■■□□□ 1.13
YBX3-202ENST00000279550 CCL23P55773 120 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 SLC24A5Q71RS6 500 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 ANKS1BQ7Z6G8 1248 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 ECHDC2Q86YB7 292 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 C12orf50Q8NA57 414 aaPredicted RBP22.12■■□□□ 1.13
YBX3-202ENST00000279550 C3orf20Q8ND61 904 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 DBF4BQ8NFT6 615 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 FAM71BQ8TC56 605 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 HEXIM2Q96MH2 286 aaKnown RBP22.12■■□□□ 1.13
YBX3-202ENST00000279550 TSPYL2Q9H2G4 693 aaPredicted RBP22.12■■□□□ 1.13
YBX3-202ENST00000279550 TMEM39AQ9NV64 488 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 PCYOX1Q9UHG3 505 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 MTUS1Q9ULD2 1270 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 UTP11Q9Y3A2 253 aaKnown RBP22.12■■□□□ 1.13
YBX3-202ENST00000279550 NME7Q9Y5B8 376 aa22.12■■□□□ 1.13
YBX3-202ENST00000279550 GOLGA6BA6NDN3 693 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 C9IYK1 514 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 XPOTO43592 962 aaKnown RBP22.11■■□□□ 1.13
YBX3-202ENST00000279550 FLT3P36888 993 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 SSR1P43307 286 aaKnown RBP22.11■■□□□ 1.13
YBX3-202ENST00000279550 TERF2Q15554 542 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 KATNAL2Q8IYT4 538 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 RNF169Q8NCN4 708 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 GSTCDQ8NEC7 633 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 C1orf54Q8WWF1 131 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 PIK3R5Q8WYR1 880 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 PGBD4Q96DM1 585 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 GAD1Q99259 594 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms