RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 BECN2A8MW95 431 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CLDN5O00501 218 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ZNF197O14709 1029 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 TRIM66O15016 1216 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 P4HA2O15460 535 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 VNN2O95498 520 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ASGR2P07307 311 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 KRT5P13647 590 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CD19P15391 556 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CEBPBP17676 345 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 TBXAS1P24557 533 aaPredicted RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 GABRR2P28476 465 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 USP8P40818 1118 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 MARSP56192 900 aaKnown RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 TEAD2Q15562 447 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 SLC5A9Q2M3M2 681 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CFAP221Q4G0U5 840 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ARHGAP15Q53QZ3 475 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 RRAGAQ7L523 313 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 FAM35AQ86V20 835 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 UNC93AQ86WB7 457 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 RNF135Q8IUD6 432 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 PLCD3Q8N3E9 789 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 LEMD2Q8NC56 503 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ENOX1Q8TC92 643 aaKnown RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 SLC2A14Q8TDB8 520 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 PSMG2Q969U7 264 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 TCEAL4Q96EI5 215 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 MCRS1Q96EZ8 462 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 SMARCD1Q96GM5 515 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 FUBP3Q96I24 572 aaKnown RBP eCLIP6.95□□□□□ -1.3
CD44-204ENST00000279452 PCMTD1Q96MG8 357 aaPredicted RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 HEXIM2Q96MH2 286 aaKnown RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 MED15Q96RN5 788 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 MYADMQ96S97 322 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 TUBGCP2Q9BSJ2 902 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ZNF518BQ9C0D4 1074 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ELOVL4Q9GZR5 314 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 VPS16Q9H269 839 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ATXN3LQ9H3M9 355 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 TRPC7Q9HCX4 862 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ABCB6Q9NP58 842 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CISHQ9NSE2 258 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.95□□□□□ -1.3
CD44-204ENST00000279452 HSFX1Q9UBD0 423 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 LIMD1Q9UGP4 676 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 MUTYHQ9UIF7 546 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 CDH7Q9ULB5 785 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 ASB3Q9Y575 518 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 NME7Q9Y5B8 376 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 PCDHB4Q9Y5E5 795 aa6.95□□□□□ -1.3
CD44-204ENST00000279452 LAMA2P24043 3122 aaKnown RBP6.95□□□□□ -1.3
CD44-204ENST00000279452 CHD7Q9P2D1 2997 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 SLC38A8A6NNN8 435 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 LOC730098B7Z3J9 87 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 F8VP50 259 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 CILPO75339 1184 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 AP1G2O75843 785 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 FGF19O95750 216 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 ABL1P00519 1130 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 POU2F2P09086 479 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 FAM163BP0C2L3 166 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 FAM200BP0CF97 657 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 CSH1P0DML2 217 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 CSH2P0DML3 217 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 EEF1GP26641 437 aaKnown RBP6.94□□□□□ -1.3
CD44-204ENST00000279452 MAP3K7CLP57077 242 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 SLC8A3P57103 927 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 TPM4P67936 248 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 CYP4F8P98187 520 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 INCA1Q0VD86 236 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 MTMR3Q13615 1198 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 ARHGAP44Q17R89 818 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 EXOC3L4Q17RC7 722 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 VWA3BQ502W6 1294 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 TCP11X2Q5H9J9 407 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 FKBP15Q5T1M5 1219 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 FAM171BQ6P995 826 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 TMEM270Q6UE05 265 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 VSTM1Q6UX27 236 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 GBP6Q6ZN66 633 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 LIMS2Q7Z4I7 341 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 DNAJB7Q7Z6W7 309 aaPredicted RBP6.94□□□□□ -1.3
CD44-204ENST00000279452 ARHGEF19Q8IW93 802 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 NPAS3Q8IXF0 933 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 TTC39CQ8N584 583 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 C12orf29Q8N999 325 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 EHBP1Q8NDI1 1231 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 FGF13Q92913 245 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 CYFIP2Q96F07 1278 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 TWNKQ96RR1 684 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 PKMYT1Q99640 499 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 KXD1Q9BQD3 176 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 B3GNT5Q9BYG0 378 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 NDST4Q9H3R1 872 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms