RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 BRD9Q9H8M2 597 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 CRTAC1Q9NQ79 661 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 PRR23AA6NEV1 266 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 STAU1O95793 577 aaKnown RBP15.44■□□□□ 0.06
HMGN3-201ENST00000275036 PDGFRBP09619 1106 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 PCSK1P29120 753 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 VEPH1Q14D04 833 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 DDR2Q16832 855 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 WDR72Q3MJ13 1102 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 GPR158Q5T848 1215 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
HMGN3-201ENST00000275036 MFSD6LQ8IWD5 586 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 GUF1Q8N442 669 aaKnown RBP15.44■□□□□ 0.06
HMGN3-201ENST00000275036 ERCC4Q92889 916 aaPredicted RBP15.44■□□□□ 0.06
HMGN3-201ENST00000275036 CCDC47Q96A33 483 aaKnown RBP15.44■□□□□ 0.06
HMGN3-201ENST00000275036 SMG9Q9H0W8 520 aaKnown RBP15.44■□□□□ 0.06
HMGN3-201ENST00000275036 ABCB6Q9NP58 842 aa15.44■□□□□ 0.06
HMGN3-201ENST00000275036 CFAP54Q96N23 3096 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
HMGN3-201ENST00000275036 TACC1O75410 805 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 TADA3O75528 432 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 FAM160A1Q05DH4 1040 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 FCHO2Q0JRZ9 810 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 BIRC3Q13489 604 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 TRPC3Q13507 836 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 NFIL3Q16649 462 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 CFAP221Q4G0U5 840 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 ZCWPW2Q504Y3 356 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 WDR44Q5JSH3 913 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 CEP135Q66GS9 1140 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 C1orf210Q8IVY1 113 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 DEPDC1BQ8WUY9 529 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 MYLPFQ96A32 169 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 CLDN23Q96B33 292 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 SLC46A2Q9BY10 475 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 OSBPL6Q9BZF3 934 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 GPR88Q9GZN0 384 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 DPEP3Q9H4B8 488 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 TRPV5Q9NQA5 729 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 NXF1Q9UBU9 619 aaKnown RBP15.43■□□□□ 0.06
HMGN3-201ENST00000275036 CDH9Q9ULB4 789 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 R4GN57 208 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 FANCMQ8IYD8 2048 aa15.43■□□□□ 0.06
HMGN3-201ENST00000275036 FRYLO94915 3013 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 PHACTR2O75167 634 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 AKAP3O75969 853 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 KIF20AO95235 890 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 FGF19O95750 216 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 F11P03951 625 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 SP9P0CG40 484 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 NR2F2P24468 414 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 SOX9P48436 509 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 AP3M2P53677 418 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 NLRP12P59046 1061 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 TNNC1P63316 161 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 NCOA4Q13772 614 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 ZACNQ401N2 412 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 SPATA2LQ8IUW3 424 aaPredicted RBP15.42■□□□□ 0.06
HMGN3-201ENST00000275036 RIN3Q8TB24 985 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 TMC2Q8TDI7 906 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 IRF7Q92985 503 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 FUBP3Q96I24 572 aaKnown RBP eCLIP15.42■□□□□ 0.06
HMGN3-201ENST00000275036 ZFYVE19Q96K21 471 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 SDCBP2Q9H190 292 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 SMYD3Q9H7B4 428 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 VRTNQ9H8Y1 702 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 PIAS3Q9Y6X2 628 aa15.42■□□□□ 0.06
HMGN3-201ENST00000275036 HELZP42694 1942 aaKnown RBP15.42■□□□□ 0.06
HMGN3-201ENST00000275036 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 ZNF263O14978 683 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 MAPK13O15264 365 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 WEE1P30291 646 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 CDC25CP30307 473 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 ATICP31939 592 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 GNL1P36915 607 aaPredicted RBP15.41■□□□□ 0.06
HMGN3-201ENST00000275036 RAP1GAPP47736 663 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 CDH8P55286 799 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 RPL10AP62906 217 aaKnown RBP15.41■□□□□ 0.06
HMGN3-201ENST00000275036 TAF12Q16514 161 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 ZNF699Q32M78 642 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 MDH1BQ5I0G3 518 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 ZNF852Q6ZMS4 543 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 SV2AQ7L0J3 742 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 SCN4BQ8IWT1 228 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 OR6B3Q8NGW1 331 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 SPATA20Q8TB22 786 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 MYCBPAPQ8TBZ2 947 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 SYAP1Q96A49 352 aaPredicted RBP15.41■□□□□ 0.06
HMGN3-201ENST00000275036 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 BCO2Q9BYV7 579 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 SNX25Q9H3E2 840 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 TASP1Q9H6P5 420 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 NDRG2Q9UN36 371 aaKnown RBP15.41■□□□□ 0.06
HMGN3-201ENST00000275036 MAGED2Q9UNF1 606 aaPredicted RBP15.41■□□□□ 0.06
HMGN3-201ENST00000275036 CCL26Q9Y258 94 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 PCDHA5Q9Y5H7 936 aa15.41■□□□□ 0.06
HMGN3-201ENST00000275036 CHADO15335 359 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms