RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SLC39A10Q9ULF5 831 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RAD54BQ9Y620 910 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CDHR2Q9BYE9 1310 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 TRAPPC3O43617 180 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF862O60290 1169 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CYP2C8P10632 490 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RBP3P10745 1247 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RARGP13631 454 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 EIF2B2P49770 351 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 DGUOKQ16854 277 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT74Q7RTS7 529 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 KCNB2Q92953 911 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 NMD3Q96D46 503 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RMND5BQ96G75 393 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM111AQ96PZ2 611 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ZSWIM1Q9BR11 485 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 NAT9Q9BTE0 207 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 PNPLA7Q6ZV29 1317 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 GYS1P13807 737 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 EIF2B5Q13144 721 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SNRNP48Q6IEG0 339 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 DENND1BQ6P3S1 775 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CDH24Q86UP0 819 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SPATA2LQ8IUW3 424 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 NOA1Q8NC60 698 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CASKIN2Q8WXE0 1202 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CPA5Q8WXQ8 436 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF669Q96BR6 464 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 MIEF2Q96C03 454 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 DCP1AQ9NPI6 582 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 NFKBIL1Q9UBC1 381 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CRKP46108 304 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 GEMP55040 296 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 WDR72Q3MJ13 1102 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 BOLA3Q53S33 107 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 NAIF1Q69YI7 327 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 LRRC6Q86X45 466 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SETD9Q8NE22 299 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SRPK1Q96SB4 655 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CACNA2D2Q9NY47 1150 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RABGEF1Q9UJ41 708 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 NCAPD2Q15021 1401 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 TSC22D2O75157 780 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CPB1P15086 417 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ITGA9Q13797 1035 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SF3B3Q15393 1217 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ADCK2Q7Z695 626 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT73Q86Y46 540 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RTKN2Q8IZC4 609 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF333Q96JL9 665 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 UBE2OQ9C0C9 1292 aaKnown RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 MMADHCQ9H3L0 296 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 RGS18Q9NS28 235 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 KLHL20Q9Y2M5 609 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 FHOD1Q9Y613 1164 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ADGRA2Q96PE1 1338 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 KLHL41O60662 606 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CST8O60676 142 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 S100A9P06702 114 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CLEC4GQ6UXB4 293 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 FEZF2Q8TBJ5 459 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 RBM46Q8TBY0 533 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 RPAP3Q9H6T3 665 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 RAVER2Q9HCJ3 691 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 TMEM8AQ9HCN3 771 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 DNAJC5BQ9UF47 199 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 POLIQ9UNA4 740 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM25AB3EWG3 89 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM25CB3EWG5 89 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM25GB3EWG6 89 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 PTPN7P35236 360 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 OTUD4Q01804 1114 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ARHGEF7Q14155 803 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 C11orf88Q6PI97 169 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 UNC45BQ8IWX7 931 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 PHF20Q9BVI0 1012 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 GANQ9H2C0 597 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ACAD9Q9H845 621 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 TRPC7Q9HCX4 862 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ASMTLO95671 621 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 SERPIND1P05546 499 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ALOX15P16050 662 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 H2AFXP16104 143 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 YWHABP31946 246 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 PPIDQ08752 370 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 NFYCQ13952 458 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 SEL1L3Q68CR1 1132 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 RDM1Q8NG50 284 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 MDM1Q8TC05 714 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 AGPAT5Q9NUQ2 364 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 C6orf203Q9P0P8 240 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ZBTB39O15060 712 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms