RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SLC22A17Q8WUG5 538 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 CYB5D2Q8WUJ1 264 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
LRTM1-201ENST00000273286 CCDC120Q96HB5 630 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 Q96M66 194 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 LXNQ9BS40 222 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 GBP3Q9H0R5 595 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 ZSWIM4Q9H7M6 989 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 BRMS1Q9HCU9 246 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 FAN1Q9Y2M0 1017 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 TMEM150BA6NC51 233 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 SLC37A4O43826 429 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 CCNT1O60563 726 aaKnown RBP10.73□□□□□ -0.69
LRTM1-201ENST00000273286 F13A1P00488 732 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 SOD2P04179 222 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 URODP06132 367 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 EPCAMP16422 314 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 SP100P23497 879 aaPredicted RBP10.73□□□□□ -0.69
LRTM1-201ENST00000273286 KLRC2P26717 231 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 SLC11A1P49279 550 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 CLCN5P51795 746 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 MESP2Q0VG99 397 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 LAMTOR4Q0VGL1 99 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 TFDP1Q14186 410 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 ANKRD1Q15327 319 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 GPR149Q86SP6 731 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 TMEM173Q86WV6 379 aaPredicted RBP10.73□□□□□ -0.69
LRTM1-201ENST00000273286 GPR65Q8IYL9 337 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
LRTM1-201ENST00000273286 STAMQ92783 540 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 ATOH1Q92858 354 aaPredicted RBP10.73□□□□□ -0.69
LRTM1-201ENST00000273286 LPPQ93052 612 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 FAM84AQ96KN4 292 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 MFSD1Q9H3U5 465 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 PDRG1Q9NUG6 133 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 ZMYM2Q9UBW7 1377 aa10.73□□□□□ -0.69
LRTM1-201ENST00000273286 MYO10Q9HD67 2058 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 FAM221AA4D161 298 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 UPK3BL1B0FP48 263 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 UPK3BL2E5RIL1 263 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 PROB1E7EW31 1015 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 INPPL1O15357 1258 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 SRGAP2CP0DJJ0 459 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 ITGA4P13612 1032 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 HOXA11P31270 313 aaPredicted RBP10.72□□□□□ -0.69
LRTM1-201ENST00000273286 CLCN4P51793 760 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 VCPP55072 806 aaKnown RBP10.72□□□□□ -0.69
LRTM1-201ENST00000273286 NPEPPSP55786 919 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 STK3Q13188 491 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 EMC2Q15006 297 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 PLA2G4FQ68DD2 849 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 MPZL3Q6UWV2 235 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 TMPRSS7Q7RTY8 843 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 RNF149Q8NC42 400 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 GATAD2BQ8WXI9 593 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 RHOVQ96L33 236 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 CCDC43Q96MW1 224 aaKnown RBP10.72□□□□□ -0.69
LRTM1-201ENST00000273286 KLHL5Q96PQ7 755 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 NFKBIZQ9BYH8 718 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 IGSF9Q9P2J2 1179 aa10.72□□□□□ -0.69
LRTM1-201ENST00000273286 WASH4PA8MWX3 477 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 NRP1O14786 923 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
LRTM1-201ENST00000273286 LYPLA2O95372 231 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 ESR1P03372 595 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 CNPP09543 421 aaKnown RBP10.71□□□□□ -0.69
LRTM1-201ENST00000273286 GBP2P32456 591 aaPredicted RBP10.71□□□□□ -0.69
LRTM1-201ENST00000273286 YARSP54577 528 aaKnown RBP10.71□□□□□ -0.69
LRTM1-201ENST00000273286 CREMQ03060 361 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 SCRN1Q12765 414 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 LONRF3Q496Y0 759 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 PIK3AP1Q6ZUJ8 805 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 ZNF280BQ86YH2 543 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 RELL1Q8IUW5 271 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 AUTS2Q8WXX7 1259 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 HAS1Q92839 578 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 TMEM143Q96AN5 459 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 TMEM74Q96NL1 305 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 AIFM3Q96NN9 605 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 RPS6KC1Q96S38 1066 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 TRIM6Q9C030 488 aaPredicted RBP10.71□□□□□ -0.69
LRTM1-201ENST00000273286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.69
LRTM1-201ENST00000273286 PCDHA12Q9UN75 941 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 KCNJ14Q9UNX9 436 aa10.71□□□□□ -0.69
LRTM1-201ENST00000273286 DENND4AQ7Z401 1863 aa10.7□□□□□ -0.7
LRTM1-201ENST00000273286 PTPRZ1P23471 2315 aaPredicted RBP10.7□□□□□ -0.7
LRTM1-201ENST00000273286 DBX1A6NMT0 343 aa10.7□□□□□ -0.7
LRTM1-201ENST00000273286 MEIS3P2A8K0S8 358 aa10.7□□□□□ -0.7
LRTM1-201ENST00000273286 DDHD2O94830 711 aa10.7□□□□□ -0.7
LRTM1-201ENST00000273286 GLUD1P00367 558 aa10.7□□□□□ -0.7
LRTM1-201ENST00000273286 POMCP01189 267 aa10.7□□□□□ -0.7
LRTM1-201ENST00000273286 XRCC6P12956 609 aaKnown RBP eCLIP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms