RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SMU1Q2TAY7 513 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 KCTD21Q4G0X4 260 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 ZNF613Q6PF04 617 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 AK8Q96MA6 479 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CCDC3Q9BQI4 270 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 GSDMCQ9BYG8 508 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 TMEM168Q9H0V1 697 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 ZNF746Q6NUN9 644 aaPredicted RBP16.35■□□□□ 0.21
UBR3-201ENST00000272793 MZT2BQ6NZ67 158 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 SAPCD2Q86UD0 394 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 TRABDQ9H4I3 376 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 TTC3P53804 2025 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 PHF20L1A8MW92 1017 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 SDC4P31431 198 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CHRNB3Q05901 458 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 PACS1Q6VY07 963 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
UBR3-201ENST00000272793 CAMK1DQ8IU85 385 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 ZNF564Q8TBZ8 553 aaPredicted RBP16.35■□□□□ 0.21
UBR3-201ENST00000272793 SPACA7Q96KW9 195 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CD209Q9NNX6 404 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 ASB14A6NK59 587 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 RASA1P20936 1047 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CCND1P24385 295 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 PPP2R1BP30154 601 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CACHD1Q5VU97 1274 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 GALNTL5Q7Z4T8 443 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 S100ZQ8WXG8 99 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 EYA1Q99502 592 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 ACAD9Q9H845 621 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 SNX6Q9UNH7 406 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 H3BMM5 538 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 LYNP07948 512 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 TFE3P19532 575 aaPredicted RBP16.35■□□□□ 0.21
UBR3-201ENST00000272793 CHRM3P20309 590 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 PBLDP30039 288 aaPredicted RBP16.35■□□□□ 0.21
UBR3-201ENST00000272793 STAT5AP42229 794 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 STAT5BP51692 787 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 USP14P54578 494 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 VPS33AQ96AX1 596 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 COA7Q96BR5 231 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 CLEC4AQ9UMR7 237 aa16.35■□□□□ 0.21
UBR3-201ENST00000272793 LOC100506127A0A0U1RQW1 187 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 MGAT4DA6NG13 374 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 HEATR1Q9H583 2144 aaKnown RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 MIEF1Q9NQG6 463 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 WWOXQ9NZC7 414 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 UBE2QL1A1L167 161 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 B2RBV5 119 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CLPTM1O96005 669 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 GRB14Q14449 540 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 AIFM2Q9BRQ8 373 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 ARL5CA6NH57 179 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 ATP9AO75110 1047 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CPSF4O95639 269 aaKnown RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 ZNF806P0C7X5 589 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CASP12Q6UXS9 341 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CITED4Q96RK1 184 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 WDR11Q9BZH6 1224 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CCDC177Q9NQR7 707 aaPredicted RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 RIC8BQ9NVN3 520 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 RNF112Q9ULX5 631 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 GNG14A0A1W2PPG7 69 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 PLOD2O00469 737 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 PLA2G4BP0C869 781 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 GRK3P35626 688 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 PYDC2Q56P42 97 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 DNAJC1Q96KC8 554 aaKnown RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 CCDC28BQ9BUN5 200 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 RSPH9Q9H1X1 276 aaPredicted RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 XPR1Q9UBH6 696 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 BHMG1C9JSJ3 638 aaPredicted RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 HMBSP08397 361 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 VAV1P15498 845 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 ALDH3A2P51648 485 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 ZCCHC7Q8N3Z6 543 aaKnown RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 ATPAF2Q8N5M1 289 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 THAP9Q9H5L6 903 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 TSPAN19P0C672 248 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 CASP1P29466 404 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 EPS8Q12929 822 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 IZUMO3Q5VZ72 239 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 POLNQ7Z5Q5 900 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 PRKAG3Q9UGI9 489 aa16.34■□□□□ 0.21
UBR3-201ENST00000272793 GPC6Q9Y625 555 aaPredicted RBP16.34■□□□□ 0.21
UBR3-201ENST00000272793 TSPAN1O60635 241 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 LDHAP00338 332 aaKnown RBP16.33■□□□□ 0.21
UBR3-201ENST00000272793 ATP5JP18859 108 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 NPEPPSP55786 919 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms