RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 BTBD9Q96Q07 612 aa13.1□□□□□ -0.31
CDH11-201ENST00000268603 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
CDH11-201ENST00000268603 NCK2O43639 380 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 PRMT3O60678 531 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 NDUFS2O75306 463 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 MYL4P12829 197 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 YWHABP31946 246 aaKnown RBP13.09□□□□□ -0.31
CDH11-201ENST00000268603 P3H1Q32P28 736 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 KAT2BQ92831 832 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 VIPAS39Q9H9C1 493 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 IL1RAPL1Q9NZN1 696 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 PLA2G4CQ9UP65 541 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 ZBTB39O15060 712 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 ACOT2P49753 483 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 RSBN1Q5VWQ0 802 aaPredicted RBP13.09□□□□□ -0.31
CDH11-201ENST00000268603 SLC4A9Q96Q91 983 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 SHANK2Q9UPX8 1470 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 A0A1W2PQ27 194 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 A0A1W2PQ64 194 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 HUNKP57058 714 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 INTS13Q9NVM9 706 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 CDC40O60508 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH11-201ENST00000268603 ALBP02768 609 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 SLFNL1Q499Z3 407 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 LRRC49Q8IUZ0 686 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 RSPH1Q8WYR4 309 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 USP7Q93009 1102 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 SHCBP1LQ9BZQ2 653 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 CAAP1Q9H8G2 361 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 CYP26A1O43174 497 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 ZNF500O60304 480 aaPredicted RBP13.09□□□□□ -0.31
CDH11-201ENST00000268603 S100A9P06702 114 aaKnown RBP13.09□□□□□ -0.31
CDH11-201ENST00000268603 FGRP09769 529 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 SMIM31A0A1B0GVY4 71 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 H7C4K7 107 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 HSMCR30P0CW71 290 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 GOLGA7BQ2TAP0 167 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 ATAD3BQ5T9A4 648 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 EIF2AK1Q9BQI3 630 aaKnown RBP13.09□□□□□ -0.31
CDH11-201ENST00000268603 PRKD2Q9BZL6 878 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 SLC9A8Q9Y2E8 581 aa13.09□□□□□ -0.31
CDH11-201ENST00000268603 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.31
CDH11-201ENST00000268603 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.31
CDH11-201ENST00000268603 NUDT2P50583 147 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 RNF44Q7L0R7 432 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 KRT73Q86Y46 540 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 MICALL2Q8IY33 904 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 CYP4Z2PQ8N1L4 340 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 MCEEQ96PE7 176 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 RMND5AQ9H871 391 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 MIEF1Q9NQG6 463 aa13.08□□□□□ -0.31
CDH11-201ENST00000268603 SAE1Q9UBE0 346 aaPredicted RBP13.08□□□□□ -0.31
CDH11-201ENST00000268603 F5H5T6 163 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 VPS26AO75436 327 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 GGPS1O95749 300 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 STAU1O95793 577 aaKnown RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 PCSK1P29120 753 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 TALDO1P37837 337 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 CPT1AP50416 773 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 DMPKQ09013 629 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 CCNIQ14094 377 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 FAM136AQ96C01 138 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 CMTM5Q96DZ9 223 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 ZNF512BQ96KM6 892 aaPredicted RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 ELL3Q9HB65 397 aaPredicted RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 HSD3B2P26439 372 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 GRK4P32298 578 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 DGKDQ16760 1214 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 PPP1R2P1Q96PQ5 205 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 SLC9A7Q96T83 725 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 TRIM24O15164 1050 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 NPTXRO95502 500 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 UBTFL6P0CB48 400 aaPredicted RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 KLC1Q07866 573 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 KRR1Q13601 381 aaKnown RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 IQCF2Q8IXL9 164 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 EMILIN2Q9BXX0 1053 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 NCKAP1Q9Y2A7 1128 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 ARIH1Q9Y4X5 557 aaPredicted RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 URODP06132 367 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 NME5P56597 212 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 PACS1Q6VY07 963 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
CDH11-201ENST00000268603 TAF8Q7Z7C8 310 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms