RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MAP3K6O95382 1288 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 RBP3P10745 1247 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 CAPZA2P47755 286 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 PRKCEQ02156 737 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 ARHGAP17Q68EM7 881 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 LRRC71Q8N4P6 559 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 NUMBP49757 651 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 ORC1Q13415 861 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 ATG4AQ8WYN0 398 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 PIK3R5Q8WYR1 880 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 NT5C1AQ9BXI3 368 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 RNPEPQ9H4A4 650 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 H0YC42 278 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 TRIP4Q15650 581 aaPredicted RBP18.7■□□□□ 0.58
COL5A3-201ENST00000264828 TRIM69Q86WT6 500 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 TNIP2Q8NFZ5 429 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 CALML6Q8TD86 181 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 SCFD2Q8WU76 684 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 OSBPL10Q9BXB5 764 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 CACNA2D2Q9NY47 1150 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 PTGER2P43116 358 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 ST8SIA6P61647 398 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 TRIM16LQ309B1 348 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 LUZP2Q86TE4 346 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 SRPK1Q96SB4 655 aaKnown RBP18.7■□□□□ 0.58
COL5A3-201ENST00000264828 KCTD10Q9H3F6 313 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 TUBE1Q9UJT0 475 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 PCDHB8Q9UN66 801 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 RGS5O15539 181 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 NQO1P15559 274 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 ALDH6A1Q02252 535 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 C1orf131Q8NDD1 294 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 TPCN2Q8NHX9 752 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 THUMPD3Q9BV44 507 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 GPR63Q9BZJ6 419 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 LSM7Q9UK45 103 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 MAGEA13PA6NCF6 341 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 EPB42P16452 691 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 NCALDP61601 193 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 ATF7IP2Q5U623 682 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 CATSPERBQ9H7T0 1116 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 CPS1P31327 1500 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 RALBP11234 206 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 HPCAP84074 193 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 GALNTL6Q49A17 601 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 GPR141Q7Z602 305 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 TFB1MQ8WVM0 346 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 CRAMP1Q96RY5 1269 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 MTERF3Q96E29 417 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 SPASTQ9UBP0 616 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 EVPLLA8MZ36 301 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 PPP1R3GB7ZBB8 358 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 NCAM1P13591 858 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 PSMA4P25789 261 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 RGS4P49798 205 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 MAPRE1Q15691 268 aaKnown RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 ZNF512Q96ME7 567 aaPredicted RBP18.69■□□□□ 0.58
COL5A3-201ENST00000264828 RBBP8Q99708 897 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 RIMBP3CA6NJZ7 1639 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 RIMBP3BA6NNM3 1639 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 RIMBP3Q9UFD9 1639 aa18.69■□□□□ 0.58
COL5A3-201ENST00000264828 UPP2O95045 317 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 AMHR2Q16671 573 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 MGAT5BQ3V5L5 792 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 PRR5LQ6MZQ0 368 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 STMN3Q9NZ72 180 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DAGLAQ9Y4D2 1042 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 TRPC5OSA6NMA1 111 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 KDM7AQ6ZMT4 941 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 OTOAQ7RTW8 1153 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 TRAPPC11Q7Z392 1133 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 SETD3Q86TU7 594 aaPredicted RBP18.68■□□□□ 0.58
COL5A3-201ENST00000264828 GLMNQ92990 594 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 SERPINB12Q96P63 405 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 RIMS1Q86UR5 1692 aaKnown RBP18.68■□□□□ 0.58
COL5A3-201ENST00000264828 ZNF23P17027 643 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
COL5A3-201ENST00000264828 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 RUVBL2Q9Y230 463 aaKnown RBP18.68■□□□□ 0.58
COL5A3-201ENST00000264828 SPATA31A6Q5VVP1 1343 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 NDUFB10O96000 172 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 PTK6Q13882 451 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 C2CD6Q53TS8 623 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 HEATR4Q86WZ0 1026 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 A0A1B0GW55 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 EXTL3O43909 919 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4L2P0CJ85 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4L3P0CJ86 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4L4P0CJ87 422 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4L5P0CJ88 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4L6P0CJ89 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4L7P0CJ90 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 CERKQ8TCT0 537 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 DUX4Q9UBX2 424 aa18.68■□□□□ 0.58
COL5A3-201ENST00000264828 RABL6Q3YEC7 729 aaPredicted RBP18.67■□□□□ 0.58
COL5A3-201ENST00000264828 ZCWPW2Q504Y3 356 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms