RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PPP1R2P3Q6NXS1 205 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 LRRN4Q8WUT4 740 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 MCEEQ96PE7 176 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 CSRNP1Q96S65 589 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 COPS7BQ9H9Q2 264 aaPredicted RBP17.01■□□□□ 0.31
GPC1-201ENST00000264039 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 APRTP07741 180 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 IMPDH2P12268 514 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 SERPINB5P36952 375 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 MLH1P40692 756 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
GPC1-201ENST00000264039 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
GPC1-201ENST00000264039 CCNG2Q16589 344 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 SFT2D3Q587I9 215 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 C16orf46Q6P387 395 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 LPCAT2Q7L5N7 544 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 HPS6Q86YV9 775 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 GLT8D2Q9H1C3 349 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 DNAJC16Q9Y2G8 782 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 MYH4Q9Y623 1939 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 TMEM150BA6NC51 233 aa17■□□□□ 0.31
GPC1-201ENST00000264039 ZBBXA8MT70 800 aa17■□□□□ 0.31
GPC1-201ENST00000264039 DNALI1O14645 258 aaPredicted RBP17■□□□□ 0.31
GPC1-201ENST00000264039 FSCN2O14926 492 aa17■□□□□ 0.31
GPC1-201ENST00000264039 MCF2LO15068 1137 aa17■□□□□ 0.31
GPC1-201ENST00000264039 NUDT2P50583 147 aa17■□□□□ 0.31
GPC1-201ENST00000264039 GAD2Q05329 585 aa17■□□□□ 0.31
GPC1-201ENST00000264039 HAUS6Q7Z4H7 955 aa17■□□□□ 0.31
GPC1-201ENST00000264039 PCGF5Q86SE9 256 aa17■□□□□ 0.31
GPC1-201ENST00000264039 ZCCHC9Q8N567 271 aaKnown RBP17■□□□□ 0.31
GPC1-201ENST00000264039 DCLK2Q8N568 766 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
GPC1-201ENST00000264039 SRPK1Q96SB4 655 aaKnown RBP17■□□□□ 0.31
GPC1-201ENST00000264039 MRPL46Q9H2W6 279 aaKnown RBP17■□□□□ 0.31
GPC1-201ENST00000264039 ESYT2A0FGR8 921 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FAM86B1E9PN63 330 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FOXD2O60548 495 aaPredicted RBP17■□□□□ 0.31
GPC1-201ENST00000264039 CAMTA2O94983 1202 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FAM86B2P0C5J1 330 aa17■□□□□ 0.31
GPC1-201ENST00000264039 KCNA4P22459 653 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FGFR3P22607 806 aa17■□□□□ 0.31
GPC1-201ENST00000264039 TAS2R40P59535 323 aa17■□□□□ 0.31
GPC1-201ENST00000264039 PAOXQ6QHF9 649 aa17■□□□□ 0.31
GPC1-201ENST00000264039 NANOGNBQ7Z5D8 188 aa17■□□□□ 0.31
GPC1-201ENST00000264039 GIPC3Q8TF64 312 aa17■□□□□ 0.31
GPC1-201ENST00000264039 SEMA6AQ9H2E6 1030 aa17■□□□□ 0.31
GPC1-201ENST00000264039 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FKBP6O75344 327 aa17■□□□□ 0.31
GPC1-201ENST00000264039 STAM2O75886 525 aa17■□□□□ 0.31
GPC1-201ENST00000264039 UQCRBP14927 111 aa17■□□□□ 0.31
GPC1-201ENST00000264039 SLC1A1P43005 524 aa17■□□□□ 0.31
GPC1-201ENST00000264039 RPL5P46777 297 aaKnown RBP17■□□□□ 0.31
GPC1-201ENST00000264039 PKNOX1P55347 436 aa17■□□□□ 0.31
GPC1-201ENST00000264039 PDK1Q15118 436 aa17■□□□□ 0.31
GPC1-201ENST00000264039 SPOPLQ6IQ16 392 aa17■□□□□ 0.31
GPC1-201ENST00000264039 FBXO33Q7Z6M2 555 aa17■□□□□ 0.31
GPC1-201ENST00000264039 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
GPC1-201ENST00000264039 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
GPC1-201ENST00000264039 PANX3Q96QZ0 392 aa17■□□□□ 0.31
GPC1-201ENST00000264039 MAN1C1Q9NR34 630 aa17■□□□□ 0.31
GPC1-201ENST00000264039 RAB6BQ9NRW1 208 aa17■□□□□ 0.31
GPC1-201ENST00000264039 GTPBP10A4D1E9 387 aaKnown RBP16.99■□□□□ 0.31
GPC1-201ENST00000264039 TFPTP0C1Z6 253 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 ELK3P41970 407 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 TSPY1Q01534 308 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 FLOT2Q14254 428 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 ZNF720Q7Z2F6 126 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 DEPDC1BQ8WUY9 529 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 SLC4A9Q96Q91 983 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 DCXO43602 365 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 TPST1O60507 370 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 ASLP04424 464 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 PSMA2P25787 234 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 HDAC4P56524 1084 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 TBL3Q12788 808 aaKnown RBP16.99■□□□□ 0.31
GPC1-201ENST00000264039 GATA6Q92908 595 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 CYLDQ9NQC7 956 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 ACTL7BQ9Y614 415 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 HSPA4LO95757 839 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 HOXD13P35453 343 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 NRLP54845 237 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 FMO1Q01740 532 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 SNRNP35Q16560 246 aaKnown RBP16.99■□□□□ 0.31
GPC1-201ENST00000264039 AMIGO2Q86SJ2 522 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 TMEM206Q9H813 350 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 SLC9A2Q9UBY0 812 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 MROH7Q68CQ1 1323 aa16.99■□□□□ 0.31
GPC1-201ENST00000264039 UBAP1LF5GYI3 381 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 GNPATO15228 680 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 ZSCAN9O15535 394 aaPredicted RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 KRT19P08727 400 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 GZMAP12544 262 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 GLRA2P23416 452 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 GNA15P30679 374 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 CENPCQ03188 943 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 ZNF554Q86TJ5 538 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms