RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 RGS9BPQ6ZS82 235 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 STKLD1Q8NE28 680 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 HAS1Q92839 578 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 TMEM176AQ96HP8 235 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 PPP1R2P1Q96PQ5 205 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 ASCC2Q9H1I8 757 aaPredicted RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 EML4Q9HC35 981 aaKnown RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 SETD4Q9NVD3 440 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 LRRC10BA6NIK2 292 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 BCAT1P54687 386 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 EVX2Q03828 476 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 KDSRQ06136 332 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 NAPEPLDQ6IQ20 393 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 TSPAN17Q96FV3 270 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 TASP1Q9H6P5 420 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 WDCPQ9H6R7 721 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 IRAK4Q9NWZ3 460 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 L1RE1Q9UN81 338 aa14.58□□□□□ -0.07
CDH3-201ENST00000264012 ADM5C9JUS6 153 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 PDHXO00330 501 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 TLR2O60603 784 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 ATICP31939 592 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 ADGRF2Q8IZF7 708 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 SLC25A41Q8N5S1 370 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 EMC1Q8N766 993 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 ZC3H15Q8WU90 426 aaKnown RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 FAM172AQ8WUF8 416 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 CCDC124Q96CT7 223 aaKnown RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 STAMBPL1Q96FJ0 436 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 ELMO2Q96JJ3 720 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 SERPINB12Q96P63 405 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 CNPY3Q9BT09 278 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 FRMD8P1Q9BZ68 369 aaPredicted RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 MUC3BQ9H195 1237 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 PCDHAC2Q9Y5I4 1007 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 MEIS2O14770 477 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 ESRRBO95718 433 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 PTPRAP18433 802 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 KRT4P19013 534 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 OTUD4Q01804 1114 aaKnown RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 ACTN3Q08043 901 aaPredicted RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 PDAP1Q13442 181 aaKnown RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 CUL3Q13618 768 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 LBRQ14739 615 aaKnown RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 COBLL1Q53SF7 1204 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 ARHGEF19Q8IW93 802 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 EFHBQ8N7U6 833 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 REPS2Q8NFH8 660 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 FBXO25Q8TCJ0 367 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 KCNV2Q8TDN2 545 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 GPBP1L1Q9HC44 474 aaPredicted RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 NDE1Q9NXR1 346 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 FAF1Q9UNN5 650 aaPredicted RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 USP20Q9Y2K6 914 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 KCNA2P16389 499 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 GEMIN4P57678 1058 aaKnown RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 MCL1Q07820 350 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 LVRNQ6Q4G3 990 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 EXD1Q8NHP7 514 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 SEC16BQ96JE7 1060 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 L3MBTL3Q96JM7 780 aaPredicted RBP14.58□□□□□ -0.08
CDH3-201ENST00000264012 SLC13A4Q9UKG4 626 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 FZD1Q9UP38 647 aa14.58□□□□□ -0.08
CDH3-201ENST00000264012 NDUFS3O75489 264 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 LAMB3Q13751 1172 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 PDE1CQ14123 709 aaPredicted RBP14.57□□□□□ -0.08
CDH3-201ENST00000264012 PDK2Q15119 407 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 C11orf63Q6NUN7 778 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 PARP9Q8IXQ6 854 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 PPP1R36Q96LQ0 422 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 INTS13Q9NVM9 706 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 GPATCH2LQ9NWQ4 482 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 NKRFO15226 690 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDH3-201ENST00000264012 KIF1CO43896 1103 aaKnown RBP14.57□□□□□ -0.08
CDH3-201ENST00000264012 ADCY3O60266 1144 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 E2F6O75461 281 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 ALDH1A1P00352 501 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 SLURP2P0DP57 97 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 PYGBP11216 843 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 AP2B1P63010 937 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 GCNT1Q02742 428 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 CAPRIN1Q14444 709 aaKnown RBP14.57□□□□□ -0.08
CDH3-201ENST00000264012 MAPRE2Q15555 327 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 RBBP7Q16576 425 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 TTC39BQ5VTQ0 682 aaPredicted RBP14.57□□□□□ -0.08
CDH3-201ENST00000264012 PCDHB7Q9Y5E2 793 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 SLC30A1Q9Y6M5 507 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 SETSIPP0DME0 302 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 IRF1P10914 325 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 PGM1P36871 562 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 KCNA1Q09470 495 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDH3-201ENST00000264012 MROH9Q5TGP6 573 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 ZPBP2Q6X784 338 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 C1orf186Q6ZWK4 172 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 MAP4K3Q8IVH8 894 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 MDM1Q8TC05 714 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms