RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 LUC7L3O95232 432 aaKnown RBP17.1■□□□□ 0.33
CTCF-201ENST00000264010 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
CTCF-201ENST00000264010 DRP2Q13474 957 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 BBS9Q3SYG4 887 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 BEST2Q8NFU1 509 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 GDAP1Q8TB36 358 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 DDX23Q9BUQ8 820 aaKnown RBP17.1■□□□□ 0.33
CTCF-201ENST00000264010 CYP3A43Q9HB55 503 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 CST3P01034 146 aaPredicted RBP17.1■□□□□ 0.33
CTCF-201ENST00000264010 MMP8P22894 467 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 FSTL1Q12841 308 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 GPR162Q16538 588 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 THEMIS2Q5TEJ8 643 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 MCUR1Q96AQ8 359 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
CTCF-201ENST00000264010 KLHL14Q9P2G3 628 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 TNFSF13BQ9Y275 285 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 ATICP31939 592 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 RAP1GAPP47736 663 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 TAS2R40P59535 323 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 PTP4A2Q12974 167 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 STILQ15468 1287 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 CFAP157Q5JU67 520 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 NUGGCQ68CJ6 796 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 MFSD7Q6UXD7 560 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 OR6J1Q8NGC5 347 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 SNX25Q9H3E2 840 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 METTL5Q9NRN9 209 aaKnown RBP17.1■□□□□ 0.33
CTCF-201ENST00000264010 ZDHHC18Q9NUE0 388 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
CTCF-201ENST00000264010 A0A0G2JLL6 359 aaPredicted RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 CST8O60676 142 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 EPHX2P34913 555 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 PSEN1P49768 467 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 PDIA2Q13087 525 aaKnown RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 LRRC38Q5VT99 294 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 PRRT2Q7Z6L0 340 aaPredicted RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 CD101Q93033 1021 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 PRMT1Q99873 361 aaKnown RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 A6NJR5 290 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 LRRC14Q15048 493 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 ZBED8Q8IZ13 594 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 CEP120Q8N960 986 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 AFG1LQ8WV93 481 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 CDT1Q9H211 546 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 GOLGA8MH3BSY2 632 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 KIF3CO14782 793 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 PAEPP09466 180 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 CETPP11597 493 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 POU5F1Q01860 360 aaKnown RBP17.09■□□□□ 0.33
CTCF-201ENST00000264010 ORC1Q13415 861 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 CRYMQ14894 314 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 DAB2IPQ5VWQ8 1189 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 C15orf39Q6ZRI6 1047 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 GSDMBQ8TAX9 411 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 ASB7Q9H672 318 aa17.09■□□□□ 0.33
CTCF-201ENST00000264010 SNUPNO95149 360 aaKnown RBP17.08■□□□□ 0.33
CTCF-201ENST00000264010 VDRP11473 427 aa17.08■□□□□ 0.33
CTCF-201ENST00000264010 PDGFRAP16234 1089 aa17.08■□□□□ 0.33
CTCF-201ENST00000264010 CDH6P55285 790 aa17.08■□□□□ 0.33
CTCF-201ENST00000264010 RPL7AP62424 266 aaKnown RBP17.08■□□□□ 0.33
CTCF-201ENST00000264010 LAMB3Q13751 1172 aa17.08■□□□□ 0.33
CTCF-201ENST00000264010 HP1BP3Q5SSJ5 553 aaPredicted RBP17.08■□□□□ 0.33
CTCF-201ENST00000264010 EEF1DP3Q658K8 133 aa17.08■□□□□ 0.33
CTCF-201ENST00000264010 CRELD2Q6UXH1 353 aaPredicted RBP17.08■□□□□ 0.33
CTCF-201ENST00000264010 CPSF3Q9UKF6 684 aaKnown RBP17.08■□□□□ 0.33
CTCF-201ENST00000264010 LACTBL1A8MY62 500 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 F8VP50 259 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 UPP2O95045 317 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 VTNP04004 478 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 EIF3EP60228 445 aaKnown RBP17.08■□□□□ 0.32
CTCF-201ENST00000264010 IFI35P80217 286 aaPredicted RBP17.08■□□□□ 0.32
CTCF-201ENST00000264010 MAP7D1Q3KQU3 841 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 ZDHHC24Q6UX98 284 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 VTA1Q9NP79 307 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 TRAPPC3O43617 180 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 ECHS1P30084 290 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 SDC4P31431 198 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 MSH2P43246 934 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 CDH8P55286 799 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 YWHAGP61981 247 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTCF-201ENST00000264010 HIF1AQ16665 826 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 TSHZ1Q6ZSZ6 1077 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 SUGP1Q8IWZ8 645 aaKnown RBP17.08■□□□□ 0.32
CTCF-201ENST00000264010 CPB2Q96IY4 423 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms