RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 IGSF9BQ9UPX0 1349 aa17.15■□□□□ 0.34
USP13-201ENST00000263966 SEC24DO94855 1032 aaPredicted RBP17.15■□□□□ 0.34
USP13-201ENST00000263966 PCNAP12004 261 aa17.15■□□□□ 0.34
USP13-201ENST00000263966 CENPCQ03188 943 aa17.15■□□□□ 0.34
USP13-201ENST00000263966 CAPRIN2Q6IMN6 1127 aaKnown RBP17.15■□□□□ 0.34
USP13-201ENST00000263966 C11orf74Q86VG3 221 aa17.15■□□□□ 0.34
USP13-201ENST00000263966 MAGEC3Q8TD91 643 aa17.15■□□□□ 0.34
USP13-201ENST00000263966 SH3GL1Q99961 368 aa17.15■□□□□ 0.34
USP13-201ENST00000263966 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
USP13-201ENST00000263966 AGMOQ6ZNB7 445 aa17.14■□□□□ 0.34
USP13-201ENST00000263966 SCAIQ8N9R8 606 aa17.14■□□□□ 0.34
USP13-201ENST00000263966 BHMTQ93088 406 aa17.14■□□□□ 0.34
USP13-201ENST00000263966 PNMA5Q96PV4 448 aa17.14■□□□□ 0.34
USP13-201ENST00000263966 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.34
USP13-201ENST00000263966 TIPRLO75663 272 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 POMCP01189 267 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 TCEA2Q15560 299 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 STARD7Q9NQZ5 370 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 GNG14A0A1W2PPG7 69 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 SPAG6O75602 509 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 KLHL31Q9H511 634 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 EXOSC4Q9NPD3 245 aaKnown RBP17.14■□□□□ 0.33
USP13-201ENST00000263966 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 CARNMT1Q8N4J0 409 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 SIK3Q9Y2K2 1263 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 CRYL1Q9Y2S2 319 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 SF3B1O75533 1304 aaKnown RBP eCLIP17.14■□□□□ 0.33
USP13-201ENST00000263966 A0A087WZ62 844 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 POTEMA6NI47 508 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.33
USP13-201ENST00000263966 HIBCHQ6NVY1 386 aaPredicted RBP17.14■□□□□ 0.33
USP13-201ENST00000263966 TFB1MQ8WVM0 346 aaKnown RBP17.14■□□□□ 0.33
USP13-201ENST00000263966 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 CASZ1Q86V15 1759 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 PWP1Q13610 501 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 C17orf53Q8N3J3 647 aaPredicted RBP17.14■□□□□ 0.33
USP13-201ENST00000263966 SEPT1Q8WYJ6 367 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 RAB6BQ9NRW1 208 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
USP13-201ENST00000263966 HIST1H2ABP04908 130 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 HIST3H2AQ7L7L0 130 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 HIST1H2ACQ93077 130 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 TCHHQ07283 1943 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 POTECB2RU33 542 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 NFIBO00712 420 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 PRKAB2O43741 272 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 CAPN15O75808 1086 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 LDHDQ86WU2 507 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 GMCL1Q96IK5 515 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 HPDLQ96IR7 371 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 FEN1P39748 380 aaKnown RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 CROCCQ5TZA2 2017 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 PACS1Q6VY07 963 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 CTNNAL1Q9UBT7 734 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 KANSL1LA0AUZ9 987 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 PDGFRAP16234 1089 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 PBLDP30039 288 aaPredicted RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 RINLQ6ZS11 566 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 SLC25A41Q8N5S1 370 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 KLHL20Q9Y2M5 609 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 CRTAMO95727 393 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 PPIL2Q13356 520 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 SCARF1Q14162 830 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 PAN2Q504Q3 1202 aaKnown RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 ATL2Q8NHH9 583 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 EME1Q96AY2 570 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 AAR2Q9Y312 384 aaKnown RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 SRP72O76094 671 aaKnown RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 ITGADQ13349 1161 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
USP13-201ENST00000263966 USP18Q9UMW8 372 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 OR6A2O95222 327 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 MSH3P20585 1137 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 TAF6P49848 677 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 THOP1P52888 689 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 CNGA2Q16280 664 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 EPS8L2Q9H6S3 715 aa17.13■□□□□ 0.33
USP13-201ENST00000263966 STK36Q9NRP7 1315 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
USP13-201ENST00000263966 MAPKAPK2P49137 400 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 ANGEL2Q5VTE6 544 aaKnown RBP17.12■□□□□ 0.33
USP13-201ENST00000263966 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
USP13-201ENST00000263966 CASP10Q92851 521 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 THAP11Q96EK4 314 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 THTPAQ9BU02 230 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 SLITRK2Q9H156 845 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 B3GAT3O94766 335 aa17.12■□□□□ 0.33
USP13-201ENST00000263966 CCNG1P51959 295 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms