RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MFSD7Q6UXD7 560 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 RASSF3Q86WH2 238 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 RHPN2Q8IUC4 686 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ABRAQ8N0Z2 381 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 RBM15BQ8NDT2 890 aaKnown RBP12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 FBXL18Q96ME1 805 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 DDX50Q9BQ39 737 aaKnown RBP12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 EPB41L1Q9H4G0 881 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 C17orf75Q9HAS0 396 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ALG13Q9NP73 1137 aaKnown RBP12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 PPARGC1AQ9UBK2 798 aaKnown RBP12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 PI4K2BG5E9Z4 385 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 OPHN1O60890 802 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 CSDE1O75534 798 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 ENO1P06733 434 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 BGNP21810 368 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 QARSP47897 775 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 KCNQ4P56696 695 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 PABPC1LQ4VXU2 614 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 MAP4K3Q8IVH8 894 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 HIC2Q96JB3 615 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 TTC1Q99614 292 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 MXRA8Q9BRK3 442 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 THTPAQ9BU02 230 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 UBE2OQ9C0C9 1292 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 PLSCR1O15162 318 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 NOMO3P69849 1222 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 PTK7Q13308 1070 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 LGSNQ5TDP6 509 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 OR6Y1Q8NGX8 325 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 RAB3IL1Q8TBN0 382 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 NAT14Q8WUY8 206 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 FAM111AQ96PZ2 611 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 PANX3Q96QZ0 392 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 ADAM33Q9BZ11 813 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 ZCWPW1Q9H0M4 648 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 ARHGEF4Q9NR80 690 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 PLA2G4CQ9UP65 541 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
CHMP2B-201ENST00000263780 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 GOLGA8SH3BPF8 625 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 GOLGA8MH3BSY2 632 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 COPEO14579 308 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 STAT2P52630 851 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 TAP1Q03518 808 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 EFTUD2Q15029 972 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 NAT8LQ8N9F0 302 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 SLC35B2Q8TB61 432 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 PRR11Q96HE9 360 aaPredicted RBP12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 ARMCX1Q9P291 453 aa12.96□□□□□ -0.33
CHMP2B-201ENST00000263780 FAM237BA0A1B0GVD1 139 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM155BO75949 473 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 PYGLP06737 847 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 GRM2Q14416 872 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 NIPA1Q7RTP0 329 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 TTC7BQ86TV6 843 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 PDSS2Q86YH6 399 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 SLC44A1Q8WWI5 657 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 RSAD2Q8WXG1 361 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 POMGNT1Q8WZA1 660 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 JADE3Q92613 823 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 LBHD1Q9BQE6 289 aaPredicted RBP12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 SIKE1Q9BRV8 207 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM121Q9BTD3 319 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 S100A14Q9HCY8 104 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 TOPORSQ9NS56 1045 aaPredicted RBP12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 CIDEBQ9UHD4 219 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 PPME1Q9Y570 386 aa12.96□□□□□ -0.34
CHMP2B-201ENST00000263780 ATP9BO43861 1147 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 CALB1P05937 261 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 UQCRBP14927 111 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 DSG3P32926 999 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 RGS2P41220 211 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 SCNN1DP51172 638 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 CLCN2P51788 898 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 NFIAQ12857 509 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 DMP1Q13316 513 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 PIGHQ14442 188 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 HIC1Q14526 733 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM259Q4ZIN3 620 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 RFX8Q6ZV50 586 aa12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 ALYREFQ86V81 257 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-201ENST00000263780 CRLF3Q8IUI8 442 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms