RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TIMP1P01033 207 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 COMTP21964 271 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 ACAT1P24752 427 aaKnown RBP24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 IKBKEQ14164 716 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 DNAJC24Q6P3W2 148 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 XYLT1Q86Y38 959 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 ANKRD52Q8NB46 1076 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 FEZF2Q8TBJ5 459 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 SLC35F5Q8WV83 523 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 TRIM43Q96BQ3 446 aaPredicted RBP24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 FAM193BQ96PV7 902 aaPredicted RBP24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 WDR35Q9P2L0 1181 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 DNAJB4Q9UDY4 337 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 LTBP2Q14767 1821 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 DDX3YO15523 660 aaKnown RBP24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 ITGB8P26012 769 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 DNA2P51530 1060 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 BCAT1P54687 386 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 SLC2A14Q8TDB8 520 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 STK32AQ8WU08 396 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 CD101Q93033 1021 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 CAPZA3Q96KX2 299 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 HNRNPABQ99729 332 aaKnown RBP24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 RTP3Q9BQQ7 232 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 SYT15Q9BQS2 421 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 MCOLN1Q9GZU1 580 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 NRDE2Q9H7Z3 1164 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 CRTAC1Q9NQ79 661 aa24.19■■□□□ 1.46
SMARCB1-201ENST00000263121 ARHGEF37A1IGU5 675 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 TMEM191CA6NGB0 347 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 MYO1FO00160 1098 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 TADA3O75528 432 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 GJB6O95452 261 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 TYMPP19971 482 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 ADORA2BP29275 332 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 TKTP29401 623 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 OR1G1P47890 313 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 TAP1Q03518 808 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 PDE4CQ08493 712 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 BST2Q10589 180 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 ZNF268Q14587 947 aaPredicted RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 UBE2Q1Q7Z7E8 422 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 METTL23Q86XA0 190 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 IPO4Q8TEX9 1081 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 SLC4A5Q9BY07 1137 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 MRPL9Q9BYD2 267 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 SYNCQ9H7C4 482 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 CDH9Q9ULB4 789 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 PCDHB8Q9UN66 801 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 KIAA0100Q14667 2235 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 MIF4GDA9UHW6 222 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 TULP2O00295 520 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 PDE2AO00408 941 aaPredicted RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 CAPN15O75808 1086 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 CKAP4Q07065 602 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 CCDC142Q17RM4 750 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 PMF1Q6P1K2 205 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 CPNE8Q86YQ8 564 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 FUKQ8N0W3 1084 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 MCRS1Q96EZ8 462 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 PRDM10Q9NQV6 1147 aa24.18■■□□□ 1.46
SMARCB1-201ENST00000263121 FNDC1Q4ZHG4 1894 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 KCNK3O14649 394 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 PROSCO94903 275 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 PCSK1P29120 753 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 RPL7AP62424 266 aaKnown RBP24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 PAQR9Q6ZVX9 377 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 ZNF572Q7Z3I7 529 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 PBKQ96KB5 322 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 MIS12Q9H081 205 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 PRDM5Q9NQX1 630 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 RNF14Q9UBS8 474 aa24.17■■□□□ 1.46
SMARCB1-201ENST00000263121 SIGLEC16A6NMB1 481 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 E5RJQ4 531 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 SLC1A1P43005 524 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 RPL34P49207 117 aaKnown RBP24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 MDH1BQ5I0G3 518 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 TMEM110Q86TL2 294 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 MCEEQ96PE7 176 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 ACBD6Q9BR61 282 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 SELENOOQ9BVL4 669 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 ST7Q9NRC1 585 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 LCMT1Q9UIC8 334 aa24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 PRG3Q9Y2Y8 225 aaPredicted RBP24.16■■□□□ 1.46
SMARCB1-201ENST00000263121 TBKBP1A7MCY6 615 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 EFCAB8A8MWE9 144 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 SPOPO43791 374 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CTNNA2P26232 953 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 MAN1A1P33908 653 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 PLCB3Q01970 1234 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 MFSD5Q6N075 450 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CYLDQ9NQC7 956 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 IP6K2Q9UHH9 426 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 ABHD14A-ACY1A0A1B0GW23 586 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 MYBPHLA2RUH7 354 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 CTAGE15A4D2H0 777 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 GOLGA8SH3BPF8 625 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 NRP1O14786 923 aa24.15■■□□□ 1.46
SMARCB1-201ENST00000263121 GABBR2O75899 941 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms