RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SNX27Q96L92 541 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 OSMRQ99650 979 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 NT5C1AQ9BXI3 368 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 MIS12Q9H081 205 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 TJP2Q9UDY2 1190 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 NEU2Q9Y3R4 380 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 hCG_1818297A0A087WSY0 165 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 LIASO43766 372 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 SHBGP04278 402 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 GPD2P43304 727 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 CPT1AP50416 773 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 MAGOHP61326 146 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 PPP2R2AP63151 447 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 GUCY1A3Q02108 690 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 ADCY2Q08462 1091 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 BYSLQ13895 437 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 ACAP1Q15027 740 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 STILQ15468 1287 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 OLFML2BQ68BL8 750 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 BEST2Q8NFU1 509 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 RAPGEF5Q92565 580 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 MCRS1Q96EZ8 462 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 FAM118BQ9BPY3 351 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
SPTLC1-201ENST00000262554 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 TRPM7Q96QT4 1865 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 TP73O15350 636 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 ZNF865P0CJ78 1059 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 AXLP30530 894 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 CDKN2BP42772 138 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 VPS41P49754 854 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 PSEN2P49810 448 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 CDR1P51861 262 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 C6orf118Q5T5N4 469 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 CST9Q5W186 159 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 TXNRD3NBQ6F5E7 133 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 LCLAT1Q6UWP7 414 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 UBA3Q8TBC4 463 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 BCAS4Q8TDM0 211 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 TLCD1Q96CP7 247 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 PGM2Q96G03 612 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 TMEM109Q9BVC6 243 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 AP5M1Q9H0R1 490 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 ZNF148Q9UQR1 794 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 SCN1AP35498 2009 aa13.62□□□□□ -0.23
SPTLC1-201ENST00000262554 IGF2BP3O00425 579 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 CAND2O75155 1236 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 LRCH4O75427 683 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 RNF8O76064 485 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 LSP1P33241 339 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 SLC25A11Q02978 314 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 LRRC52Q8N7C0 313 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 ACSF2Q96CM8 615 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 STMN4Q9H169 189 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 ZWILCHQ9H900 591 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 DNPEPQ9ULA0 475 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 DRG1Q9Y295 367 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 TLDC2A0PJX2 215 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 RGS16O15492 202 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 MYL3P08590 195 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 KLRC2P26717 231 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 ZNF157P51786 506 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 ZBTB6Q15916 424 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 IZUMO3Q5VZ72 239 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 CEP128Q6ZU80 1094 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 RASAL3Q86YV0 1011 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 EMC1Q8N766 993 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 PPP1R13LQ8WUF5 828 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 DNAJB3Q8WWF6 145 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 LENG1Q96BZ8 264 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 ZMAT2Q96NC0 199 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 KATNAL1Q9BW62 490 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 CDC42EP4Q9H3Q1 356 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 CNOT10Q9H9A5 744 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 LRRC4CQ9HCJ2 640 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 AAASQ9NRG9 546 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 ASNSD1Q9NWL6 643 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 Q9Y3F1 56 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 SNX9Q9Y5X1 595 aa13.61□□□□□ -0.23
SPTLC1-201ENST00000262554 TRIP12Q14669 1992 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-201ENST00000262554 C3orf70A6NLC5 250 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-201ENST00000262554 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-201ENST00000262554 HAS3O00219 553 aa13.6□□□□□ -0.23
SPTLC1-201ENST00000262554 CHKAP35790 457 aa13.6□□□□□ -0.23
SPTLC1-201ENST00000262554 RGS2P41220 211 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms