RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MIIPQ5JXC2 388 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 SCARA5Q6ZMJ2 495 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 SPATA31D4Q6ZUB0 917 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 CASP10Q92851 521 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
PFDN1-201ENST00000261813 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 OXCT2Q9BYC2 517 aaPredicted RBP12.36□□□□□ -0.43
PFDN1-201ENST00000261813 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
PFDN1-201ENST00000261813 DDX43Q9NXZ2 648 aaKnown RBP12.36□□□□□ -0.43
PFDN1-201ENST00000261813 TACC1O75410 805 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 ABLIM3O94929 683 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 C1RP00736 705 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
PFDN1-201ENST00000261813 CPB1P15086 417 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
PFDN1-201ENST00000261813 LMO2P25791 158 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 ASPAP45381 313 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 GBP6Q6ZN66 633 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 EP400NLQ6ZTU2 488 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 LMO3Q8TAP4 145 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 HLA-CQ95604 372 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
PFDN1-201ENST00000261813 BCO2Q9BYV7 579 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 IMPG2Q9BZV3 1241 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 ZCWPW1Q9H0M4 648 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 FBXW11Q9UKB1 542 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 XIRP2A4UGR9 3374 aa12.35□□□□□ -0.43
PFDN1-201ENST00000261813 NRDCO43847 1150 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 VNN2O95498 520 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 P4HA1P13674 534 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 KCNA5P22460 613 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
PFDN1-201ENST00000261813 LHX1P48742 406 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 KCNQ1P51787 676 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 GPR17Q13304 367 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 CCDC142Q17RM4 750 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 FIGNQ5HY92 759 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 ANKRD54Q6NXT1 300 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 RNF19BQ6ZMZ0 732 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 LRRTM3Q86VH5 581 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 CCDC150Q8NCX0 1101 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-201ENST00000261813 ZNF461Q8TAF7 563 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 FEZF2Q8TBJ5 459 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 FAM81BQ96LP2 452 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 PGLYRP2Q96PD5 576 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 NIF3L1Q9GZT8 377 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 TMLHEQ9NVH6 421 aa12.34□□□□□ -0.43
PFDN1-201ENST00000261813 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 H3BQ06 376 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 TEX33O43247 280 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 SEC24AO95486 1093 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 WEE2P0C1S8 567 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 SRGAP2BP0DMP2 458 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 ATF2P15336 505 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 GNL1P36915 607 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 PBX1P40424 430 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 CDR1P51861 262 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 LRMPQ12912 555 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 CLUL1Q15846 466 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 SLC39A12Q504Y0 691 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 WDR44Q5JSH3 913 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 TPGS2Q68CL5 300 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 TMC6Q7Z403 805 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 FMNL3Q8IVF7 1028 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 OR6B3Q8NGW1 331 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 ARID3AQ99856 593 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 SYT15Q9BQS2 421 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 APOL5Q9BWW9 433 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 CRISPLD1Q9H336 500 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 DPEP3Q9H4B8 488 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 DZANK1Q9NVP4 752 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
PFDN1-201ENST00000261813 NCOR1O75376 2440 aa12.33□□□□□ -0.44
PFDN1-201ENST00000261813 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 A8MXQ7 604 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 ATP2C2O75185 946 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 RFPL2O75678 378 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 C8AP07357 584 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
PFDN1-201ENST00000261813 RFX1P22670 979 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms