RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 AKR1B1P15121 316 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
KPNA3-201ENST00000261667 MAGEA4P43358 317 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
KPNA3-201ENST00000261667 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 CHCHD4Q8N4Q1 142 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 TLR10Q9BXR5 811 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 ENTPD7Q9NQZ7 604 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 POLE3Q9NRF9 147 aa11.09□□□□□ -0.63
KPNA3-201ENST00000261667 KRT1P04264 644 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 MAGP20916 626 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 RPA1P27694 616 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 AQP5P55064 265 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PPM1LQ5SGD2 360 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 SCARA3Q6AZY7 606 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 HMBOX1Q6NT76 420 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 GALNT18Q6P9A2 607 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PLEKHM3Q6ZWE6 761 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 FNDC8Q8TC99 324 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 VPS11Q9H270 941 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 UCKL1Q9NWZ5 548 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 TBC1D14Q9P2M4 693 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PCDH11XQ9BZA7 1347 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PCDH11YQ9BZA8 1340 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 TMCC2O75069 709 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 BCAP31P51572 246 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 MFAP3P55082 362 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 GNG2P59768 71 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PUS10Q3MIT2 529 aaKnown RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 KLHDC10Q6PID8 442 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 C6orf89Q6UWU4 347 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 LARP4BQ92615 738 aaKnown RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 FAM111AQ96PZ2 611 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF717Q9BY31 904 aaPredicted RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 GCOM2Q9BZD3 368 aaPredicted RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PLAGL2Q9UPG8 496 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 AXIN1O15169 862 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 CLOCKO15516 846 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PEX11AO75192 247 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 ABL1P00519 1130 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 IL12AP29459 219 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 ARHGDIAP52565 204 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 ITGA8P53708 1063 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 TAF5Q15542 800 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 NECAB2Q7Z6G3 386 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 CCDC60Q8IWA6 550 aaPredicted RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 GOLM1Q8NBJ4 401 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 DIS3LQ8TF46 1054 aaKnown RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 MID2Q9UJV3 735 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 NAALADL1Q9UQQ1 740 aa11.08□□□□□ -0.64
KPNA3-201ENST00000261667 COL5A2P05997 1499 aaPredicted RBP11.08□□□□□ -0.64
KPNA3-201ENST00000261667 PABPN1LA6NDY0 278 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 IFNAR1P17181 557 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 PLCG1P19174 1290 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TRAPPC10P48553 1259 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 CD97P48960 835 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 CHI3L2Q15782 390 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 AMIGO2Q86SJ2 522 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 OR9Q1Q8NGQ5 310 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TRPC4APQ8TEL6 797 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TOR3AQ9H497 397 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 INPP5FQ9Y2H2 1132 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 IFI30P13284 250 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ITGA4P13612 1032 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 HADHQ16836 314 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ATAD3BQ5T9A4 648 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 SLC9A4Q6AI14 798 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 PRUNE1Q86TP1 453 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 IFNEQ86WN2 208 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 EFHD2Q96C19 240 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 OXNAD1Q96HP4 312 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 NARS2Q96I59 477 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 HEPHQ9BQS7 1158 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 EBF3Q9H4W6 596 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 WBP11Q9Y2W2 641 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 MAST3O60307 1309 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 CAPN8A6NHC0 703 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 RIPK2O43353 540 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF862O60290 1169 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 BMP10O95393 424 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 NADKO95544 446 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF806P0C7X5 589 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TNFAIP2Q03169 654 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ACAP2Q15057 778 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 LDLRAP1Q5SW96 308 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 SYCP2LQ5T4T6 812 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 BNC2Q6ZN30 1099 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 UNC45BQ8IWX7 931 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms