RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 AVILO75366 819 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 GCLCP48506 637 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 ALDH18A1P54886 795 aaKnown RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 YWHAGP61981 247 aaKnown RBP eCLIP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 OCRLQ01968 901 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 PTK7Q13308 1070 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 IGDCC3Q8IVU1 814 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 CEP120Q8N960 986 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 BANPQ8N9N5 519 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 ATP11CQ8NB49 1132 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 ACTL9Q8TC94 416 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 TRIM11Q96F44 468 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 RIT2Q99578 217 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 SHCBP1LQ9BZQ2 653 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 CYP1A1P04798 512 aaPredicted RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 OTUD4Q01804 1114 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 GCNT1Q02742 428 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 AP1B1Q10567 949 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 ARID3BQ8IVW6 561 aaPredicted RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RBM15BQ8NDT2 890 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 LRRN4Q8WUT4 740 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CPT1BQ92523 772 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 APOBEC3GQ9HC16 384 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 STX18Q9P2W9 335 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 TELO2Q9Y4R8 837 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 MAGEA13PA6NCF6 341 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RNF8O76064 485 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 TMEM63AO94886 807 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 GSTT1P30711 240 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 PHBP35232 272 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 ZNF252P-AS1Q0IIN9 211 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 DGKZQ13574 1117 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 SMAD1Q15797 465 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 TKFCQ3LXA3 575 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 DACT2Q5SW24 774 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RCOR2Q8IZ40 523 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 FAM71DQ8N9W8 422 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 SKA1Q96BD8 255 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RBM41Q96IZ5 413 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CEP170P1Q96L14 293 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 IQCGQ9H095 443 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CYB561D2O14569 222 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 DLDP09622 509 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 NLRP11P59045 1033 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 KBTBD12Q3ZCT8 623 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 ZBTB41Q5SVQ8 909 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 STRIP1Q5VSL9 837 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 C1orf146Q5VVC0 180 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RIPOR1Q6ZS17 1223 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 MAP4K3Q8IVH8 894 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CDAN1Q8IWY9 1227 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 ABRAQ8N0Z2 381 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RSAD2Q8WXG1 361 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CFAP36Q96G28 342 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 ZBTB45Q96K62 511 aaPredicted RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 RILPQ96NA2 401 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 ACAP3Q96P50 834 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 EPAS1Q99814 870 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 XPO7Q9UIA9 1087 aaKnown RBP16.67■□□□□ 0.26
LMNB1-201ENST00000261366 FOCADQ5VW36 1801 aa16.67■□□□□ 0.26
LMNB1-201ENST00000261366 CST8O60676 142 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 MAP3K6O95382 1288 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 LYNP07948 512 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 RANBP1P43487 201 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 CEP128Q6ZU80 1094 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 DCAKDQ8WVC6 231 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 IWS1Q96ST2 819 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 PARVAQ9NVD7 372 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 PCSK1NQ9UHG2 260 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 ABLIM1O14639 778 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 PYGLP06737 847 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 CD48P09326 243 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 RARBP10826 455 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
LMNB1-201ENST00000261366 MRPS9P82933 396 aaKnown RBP16.66■□□□□ 0.26
LMNB1-201ENST00000261366 OASLQ15646 514 aaKnown RBP16.66■□□□□ 0.26
LMNB1-201ENST00000261366 DNAJC24Q6P3W2 148 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 MTHFD1LQ6UB35 978 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 ZCCHC23Q6ZST2 131 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 ANO5Q75V66 913 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 USP6NLQ92738 828 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 IFT43Q96FT9 208 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
LMNB1-201ENST00000261366 MFSD14AQ96MC6 490 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 FOXP3Q9BZS1 431 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 RANBP17Q9H2T7 1088 aaKnown RBP16.66■□□□□ 0.26
LMNB1-201ENST00000261366 OCEL1Q9H607 264 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 AGO4Q9HCK5 861 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms