RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 BEND6Q5SZJ8 279 aaPredicted RBP23.61■■□□□ 1.37
SIX3-201ENST00000260653 DEFB118Q96PH6 123 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 METTL5Q9NRN9 209 aaKnown RBP23.61■■□□□ 1.37
SIX3-201ENST00000260653 ZSCAN5CA6NGD5 496 aaPredicted RBP23.61■■□□□ 1.37
SIX3-201ENST00000260653 SIGLEC16A6NMB1 481 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 CCDC130P13994 396 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 MCM3P25205 808 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 SSR1P43307 286 aaKnown RBP23.61■■□□□ 1.37
SIX3-201ENST00000260653 RGS7P49802 495 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 LLGL1Q15334 1064 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 CRYBG2Q8N1P7 616 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 BEGAINQ9BUH8 593 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 PAK6Q9NQU5 681 aaPredicted RBP23.61■■□□□ 1.37
SIX3-201ENST00000260653 INPP5FQ9Y2H2 1132 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 TDRD15B5MCY1 1934 aaKnown RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 E5RJQ4 531 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 DNM1LO00429 736 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 HEXIM1O94992 359 aaKnown RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 GJC1P36383 396 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 ZNF268Q14587 947 aaPredicted RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 KCTD19Q17RG1 926 aaPredicted RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 WSCD1Q658N2 575 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 ECHDC2Q86YB7 292 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 ZDHHC14Q8IZN3 488 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 WDR35Q9P2L0 1181 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.6■■□□□ 1.37
SIX3-201ENST00000260653 TCRBV7S2A1N4TA0A589 114 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 WARSP23381 471 aaKnown RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 ARHGAP17Q68EM7 881 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 PMF1Q6P1K2 205 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 ZNF598Q86UK7 904 aaKnown RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 RTN4RL1Q86UN2 441 aaPredicted RBP23.6■■□□□ 1.37
SIX3-201ENST00000260653 RHOT1Q8IXI2 618 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 EMC1Q8N766 993 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 PGBD4Q96DM1 585 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 SENP8Q96LD8 212 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 HESX1Q9UBX0 185 aa23.6■■□□□ 1.37
SIX3-201ENST00000260653 PSTPIP1O43586 416 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 CLUL1Q15846 466 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 CCDC142Q17RM4 750 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 MCRS1Q96EZ8 462 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 AMACRQ9UHK6 382 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 ADORA2BP29275 332 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 CDK7P50613 346 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 CCNI2Q6ZMN8 369 aaPredicted RBP23.59■■□□□ 1.37
SIX3-201ENST00000260653 SLC13A5Q86YT5 568 aaPredicted RBP23.59■■□□□ 1.37
SIX3-201ENST00000260653 LINC01599Q8WXQ3 324 aa23.59■■□□□ 1.37
SIX3-201ENST00000260653 PIWIL1Q96J94 861 aaKnown RBP23.59■■□□□ 1.37
SIX3-201ENST00000260653 ESYT3A0FGR9 886 aa23.58■■□□□ 1.37
SIX3-201ENST00000260653 UPP1Q16831 310 aa23.58■■□□□ 1.37
SIX3-201ENST00000260653 FAM126BQ8IXS8 530 aa23.58■■□□□ 1.37
SIX3-201ENST00000260653 RUBCNQ92622 972 aa23.58■■□□□ 1.37
SIX3-201ENST00000260653 GOLGA6L10A0A0M3HER8 536 aa23.58■■□□□ 1.36
SIX3-201ENST00000260653 SKIP12755 728 aa23.58■■□□□ 1.36
SIX3-201ENST00000260653 ACAT1P24752 427 aaKnown RBP23.58■■□□□ 1.36
SIX3-201ENST00000260653 GUCY2DQ02846 1103 aa23.58■■□□□ 1.36
SIX3-201ENST00000260653 PIGHQ14442 188 aaPredicted RBP23.58■■□□□ 1.36
SIX3-201ENST00000260653 FAM102AQ5T9C2 384 aaPredicted RBP23.58■■□□□ 1.36
SIX3-201ENST00000260653 LRRC8DQ7L1W4 858 aa23.58■■□□□ 1.36
SIX3-201ENST00000260653 SLC35F5Q8WV83 523 aa23.58■■□□□ 1.36
SIX3-201ENST00000260653 RGS18Q9NS28 235 aa23.58■■□□□ 1.36
SIX3-201ENST00000260653 ATP2C2O75185 946 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 FAM183BPQ6ZVS7 135 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 PLCD3Q8N3E9 789 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 NIPA2Q8N8Q9 360 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 B3GALNT2Q8NCR0 500 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 SLC2A14Q8TDB8 520 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 PLVAPQ9BX97 442 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 SLITRK6Q9H5Y7 841 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 EPB41L5Q9HCM4 733 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 LCMT1Q9UIC8 334 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 TIMM13Q9Y5L4 95 aaPredicted RBP23.57■■□□□ 1.36
SIX3-201ENST00000260653 C9IYK1 514 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 SASH3O75995 380 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 PSMA2P25787 234 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 RPL9P32969 192 aaKnown RBP23.57■■□□□ 1.36
SIX3-201ENST00000260653 PRELID2Q8N945 189 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 TNIP3Q96KP6 325 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 RNF208Q9H0X6 261 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 KLHL11Q9NVR0 708 aa23.57■■□□□ 1.36
SIX3-201ENST00000260653 GABRDO14764 452 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 SELPP16109 830 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 TKTP29401 623 aaKnown RBP23.56■■□□□ 1.36
SIX3-201ENST00000260653 CDR1P51861 262 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 GRIK3Q13003 919 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 ATP13A4Q4VNC1 1196 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 PAN2Q504Q3 1202 aaKnown RBP23.56■■□□□ 1.36
SIX3-201ENST00000260653 OR6B2Q6IFH4 312 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 KATNAL2Q8IYT4 538 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 HERPUD2Q9BSE4 406 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 SLC4A5Q9BY07 1137 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 FUT8Q9BYC5 575 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 UBN1Q9NPG3 1134 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 SETSIPP0DME0 302 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 HSPA6P17066 643 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 ANKRD52Q8NB46 1076 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 GDF3Q9NR23 364 aa23.56■■□□□ 1.36
SIX3-201ENST00000260653 GABBR2O75899 941 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 CCL5P13501 91 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 BCAT1P54687 386 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms