RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 MICAL2O94851 1124 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 EFEMP2O95967 443 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 CFHP08603 1231 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 OR4Q2P0C623 313 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 FAM228BP0C875 321 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 CPB1P15086 417 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 MRPL58Q14197 206 aaKnown RBP16.54■□□□□ 0.24
GYPC-201ENST00000259254 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
GYPC-201ENST00000259254 CNGA2Q16280 664 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 SLC18A3Q16572 532 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 SLC39A12Q504Y0 691 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 CCDC122Q5T0U0 273 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 PPP1R26Q5T8A7 1209 aaPredicted RBP16.54■□□□□ 0.24
GYPC-201ENST00000259254 ARHGAP17Q68EM7 881 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 DENND1BQ6P3S1 775 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 TRIM72Q6ZMU5 477 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 TOGARAM2Q6ZUX3 1019 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 SPRED2Q7Z698 418 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 MYCBPAPQ8TBZ2 947 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 PPM1EQ8WY54 764 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 ARNTL2Q8WYA1 636 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 PIK3R5Q8WYR1 880 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 MYLPFQ96A32 169 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 SYT11Q9BT88 431 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 C11orf84Q9BUA3 381 aaPredicted RBP16.54■□□□□ 0.24
GYPC-201ENST00000259254 OXCT2Q9BYC2 517 aaPredicted RBP16.54■□□□□ 0.24
GYPC-201ENST00000259254 ALG13Q9NP73 1137 aaKnown RBP16.54■□□□□ 0.24
GYPC-201ENST00000259254 CHST7Q9NS84 486 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 TSPAN16Q9UKR8 245 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 PRUNE2Q8WUY3 3088 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 SCN1AP35498 2009 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 EIF3CLB5ME19 914 aaKnown RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 RFXAPO00287 272 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 RB1P06400 928 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 DSG1Q02413 1049 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 CLEC16AQ2KHT3 1053 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 ASTE1Q2TB18 679 aaPredicted RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 NAA35Q5VZE5 725 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 LCLAT1Q6UWP7 414 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 C4orf50Q6ZRC1 276 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 TMC7Q7Z402 723 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 SPATA2LQ8IUW3 424 aaPredicted RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 TMEM35BQ8NCS4 154 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 ACRBPQ8NEB7 543 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 UBA3Q8TBC4 463 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 EIF3CQ99613 913 aaKnown RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 LUC7LQ9NQ29 371 aaKnown RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 ENTPD7Q9NQZ7 604 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 MRPL17Q9NRX2 175 aaKnown RBP16.53■□□□□ 0.24
GYPC-201ENST00000259254 MTRRQ9UBK8 725 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 PYCARDQ9ULZ3 195 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 PCDHGC3Q9UN70 934 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 CDY1Q9Y6F8 540 aa16.53■□□□□ 0.24
GYPC-201ENST00000259254 CLDN5O00501 218 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 LSM8O95777 96 aaKnown RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 RPL17P18621 184 aaKnown RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 NSFP46459 744 aaKnown RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 SLC8A3P57103 927 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 KRT83P78385 493 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 ALKBH5Q6P6C2 394 aaKnown RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 FAM35AQ86V20 835 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 LRRTM3Q86VH5 581 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 PALB2Q86YC2 1186 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 C1orf131Q8NDD1 294 aaKnown RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 FBXO22Q8NEZ5 403 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 SLC30A5Q8TAD4 765 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 PCED1BQ96HM7 432 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 HNRNPABQ99729 332 aaKnown RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 COL25A1Q9BXS0 654 aaPredicted RBP16.52■□□□□ 0.24
GYPC-201ENST00000259254 B3GNT5Q9BYG0 378 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 ZBP1Q9H171 429 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 TMLHEQ9NVH6 421 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 NAGPAQ9UK23 515 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 SSX2IPQ9Y2D8 614 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 BACE2Q9Y5Z0 518 aa16.52■□□□□ 0.24
GYPC-201ENST00000259254 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 LPXNO60711 386 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 CCDC175P0C221 793 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 FAM200BP0CF97 657 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 CTSAP10619 480 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 OR1D2P34982 312 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 MAGEA1P43355 309 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 BCAT1P54687 386 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 ERVK-21P61565 698 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 CREMQ03060 361 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 GPM6BQ13491 265 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 NFE2Q16621 373 aaPredicted RBP16.51■□□□□ 0.23
GYPC-201ENST00000259254 FAM171BQ6P995 826 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 KIAA1328Q86T90 577 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 FUKQ8N0W3 1084 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 ANKRD52Q8NB46 1076 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms