RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SRGAP2BP0DMP2 458 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 BPIFB4P59827 614 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 LAMC2Q13753 1193 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SPARCL1Q14515 664 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 QPCTQ16769 361 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 TAPT1Q6NXT6 567 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 PMF1Q6P1K2 205 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CCDC62Q6P9F0 684 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SCN4BQ8IWT1 228 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 WDTC1Q8N5D0 677 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 AGR3Q8TD06 166 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 WNT8AQ9H1J5 351 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 MROH8Q9H579 483 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 MRPL47Q9HD33 250 aaKnown RBP9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CPSF3Q9UKF6 684 aaKnown RBP9.57□□□□□ -0.88
CKAP2-201ENST00000258607 HMBSP08397 361 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 RBP3P10745 1247 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 UNGP13051 313 aaPredicted RBP9.57□□□□□ -0.88
CKAP2-201ENST00000258607 ECHS1P30084 290 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 MIPP30301 263 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 LSP1P33241 339 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 PEX5P50542 639 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 MAP3K7CLP57077 242 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 GCNT1Q02742 428 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 BYSLQ13895 437 aaKnown RBP9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CA9Q16790 459 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CST9Q5W186 159 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 C11orf63Q6NUN7 778 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 TP53INP2Q8IXH6 220 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CCDC110Q8TBZ0 833 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 KCNK16Q96T55 309 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SNX25Q9H3E2 840 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CALCOCO1Q9P1Z2 691 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SLC17A6Q9P2U8 582 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 GABRQQ9UN88 632 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 FOCADQ5VW36 1801 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 ZNF831Q5JPB2 1677 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 NFASCO94856 1347 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 TRIOO75962 3097 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 EXOC1LA0A1B0GW35 172 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 PRPSAP2O60256 369 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 B3GAT3O94766 335 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 PROSCO94903 275 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 MMP3P08254 477 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 TGFB3P10600 412 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 PRLRP16471 622 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 HOXA7P31268 230 aaPredicted RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 TARBP2Q15633 366 aaKnown RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 XRRA1Q6P2D8 792 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 USP50Q70EL3 339 aaPredicted RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 HOOK3Q86VS8 718 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 ST13P5Q8NFI4 369 aaPredicted RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 WHAMMQ8TF30 809 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 ARHGEF2Q92974 986 aaKnown RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 C17orf75Q9HAS0 396 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 KIAA1586Q9HCI6 787 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 INTS9Q9NV88 658 aaKnown RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 CWC15Q9P013 229 aaKnown RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 PCDHA3Q9Y5H8 950 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 TCRBV7S3A2A0A539 114 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 MIF4GDA9UHW6 222 aaKnown RBP9.56□□□□□ -0.88
CKAP2-201ENST00000258607 KCNK1O00180 336 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 C2CD2LO14523 706 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 KCNN4O15554 427 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 ASPAP45381 313 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 SCNN1GP51170 649 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 WSCD1Q658N2 575 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 NUGGCQ68CJ6 796 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 MON1BQ7L1V2 547 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 PAF1Q8N7H5 531 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 RDM1Q8NG50 284 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 FAM136AQ96C01 138 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 CABS1Q96KC9 395 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 RPS6KC1Q96S38 1066 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 TRIP11Q15643 1979 aa9.56□□□□□ -0.88
CKAP2-201ENST00000258607 MYO1CO00159 1063 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 TSPAN1O60635 241 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 BRCC3P46736 316 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 RAD23BP54727 409 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SESN2P58004 480 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ZNF252P-AS1Q0IIN9 211 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 OVGP1Q12889 678 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CRHR2Q13324 411 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 NFIL3Q16649 462 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SH3D19Q5HYK7 790 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ANKRD22Q5VYY1 191 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 DSTYKQ6XUX3 929 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 FAM183BPQ6ZVS7 135 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 WDR49Q8IV35 697 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 UNC45BQ8IWX7 931 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 IQCKQ8N0W5 287 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CCDC63Q8NA47 563 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 FAM172AQ8WUF8 416 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 TMEM176AQ96HP8 235 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 C16orf70Q9BSU1 422 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 GCOM2Q9BZD3 368 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SLC13A1Q9BZW2 595 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 RAB6BQ9NRW1 208 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 FAM114A2Q9NRY5 505 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 MAP3K20Q9NYL2 800 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms