RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PCED1BQ96HM7 432 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 BCO2Q9BYV7 579 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 DNAI2Q9GZS0 605 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 NIF3L1Q9GZT8 377 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 UXTQ9UBK9 157 aaPredicted RBP25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 COQ4Q9Y3A0 265 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 NME7Q9Y5B8 376 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 NUMBLQ9Y6R0 609 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 ASPAP45381 313 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 MDH1BQ5I0G3 518 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 WDR44Q5JSH3 913 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 SHKBP1Q8TBC3 707 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 RSAD2Q8WXG1 361 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 GCNAQ96QF7 691 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 LRFN3Q9BTN0 628 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 SDCBP2Q9H190 292 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 FAM124BQ9H5Z6 455 aaPredicted RBP25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 DACH1Q9UI36 760 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 ZMYM5Q9UJ78 669 aa25.95■■□□□ 1.74
SDF2L1-201ENST00000248958 ATP8B3O60423 1300 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 A0A1W2PRU2 124 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 TMEM221A6NGB7 291 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 M0R296 226 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 TRIM66O15016 1216 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 ECI2O75521 394 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 GABRR2P28476 465 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 RAP1GAPP47736 663 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 CDR1P51861 262 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 MARSP56192 900 aaKnown RBP25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 ARHGAP15Q53QZ3 475 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 PARM1Q6UWI2 310 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 TTC39CQ8N584 583 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 FGF14Q92915 247 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 SRRTQ9BXP5 876 aaKnown RBP25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 ELOVL4Q9GZR5 314 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 ATXN3LQ9H3M9 355 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 DPEP3Q9H4B8 488 aa25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 APOBEC3GQ9HC16 384 aaKnown RBP25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 ZNF334Q9HCZ1 680 aaPredicted RBP25.94■■□□□ 1.74
SDF2L1-201ENST00000248958 FAM86C2PA6NEL3 165 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 PMM2O15305 246 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 CCDC192P0DO97 292 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 SRFP11831 508 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 BDNFP23560 247 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 ANXA13P27216 316 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 INCA1Q0VD86 236 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 TEAD2Q15562 447 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 DDR2Q16832 855 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 CCDC142Q17RM4 750 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 CBWD6Q4V339 395 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 CBWD3Q5JTY5 395 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 CBWD5Q5RIA9 395 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 SCN4BQ8IWT1 228 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 ELSPBP1Q96BH3 223 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 ELMO3Q96BJ8 720 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 TRMT2BQ96GJ1 504 aaKnown RBP25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 SPATA17Q96L03 361 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 EHD2Q9NZN4 543 aa25.93■■□□□ 1.74
SDF2L1-201ENST00000248958 DENND4CQ5VZ89 1909 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 NOL4O94818 638 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 HMGA1P17096 107 aaKnown RBP25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 GJA1P17302 382 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 GRIK1P39086 918 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 GPR15P49685 360 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 CETN1Q12798 172 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 GAREM2Q75VX8 874 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 CRYBG2Q8N1P7 616 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 SEMA4DQ92854 862 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 SMARCD2Q92925 531 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 E2F7Q96AV8 911 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 ASIC4Q96FT7 647 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 C8orf48Q96LL4 319 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 ASB16Q96NS5 453 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 IL21Q9HBE4 155 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 ZFP14Q9HCL3 533 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 TECTAO75443 2155 aa25.92■■□□□ 1.74
SDF2L1-201ENST00000248958 GREB1Q4ZG55 1949 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 SLC38A8A6NNN8 435 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 SOBPA7XYQ1 873 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 P4HA2O15460 535 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 MBD3O95983 291 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 FMO5P49326 533 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 NDST1P52848 882 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 NLRP12P59046 1061 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 CT47A1Q5JQC4 288 aaPredicted RBP25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 GPR152Q8TDT2 470 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 MYRFLQ96LU7 910 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 SLITRK6Q9H5Y7 841 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 TRPV4Q9HBA0 871 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 SLC2A4RGQ9NR83 387 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 RAPGEFL1Q9UHV5 662 aa25.91■■□□□ 1.74
SDF2L1-201ENST00000248958 NUP210Q8TEM1 1887 aaPredicted RBP25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 DDX6P26196 483 aaKnown RBP eCLIP25.9■■□□□ 1.741e-323■■■■□ 20.9
SDF2L1-201ENST00000248958 FAM78AQ5JUQ0 283 aa25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 ZSCAN18Q8TBC5 510 aaPredicted RBP25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 GPT2Q8TD30 523 aa25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 NT5C1AQ9BXI3 368 aa25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 B3GNT5Q9BYG0 378 aa25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 SMOC2Q9H3U7 446 aa25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 TASP1Q9H6P5 420 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms