RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TTC30AQ86WT1 665 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 DNAJC5GQ8N7S2 189 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 C12orf29Q8N999 325 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 NOA1Q8NC60 698 aaKnown RBP14.99□□□□□ -0.01
SDF2-201ENST00000247020 B3GALNT2Q8NCR0 500 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 SLC35F5Q8WV83 523 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 TSC1Q92574 1164 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 BTBD6Q96KE9 485 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 HNRNPABQ99729 332 aaKnown RBP14.99□□□□□ -0.01
SDF2-201ENST00000247020 SLC4A5Q9BY07 1137 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 ARGLU1Q9NWB6 273 aaPredicted RBP14.99□□□□□ -0.01
SDF2-201ENST00000247020 SCN5AQ14524 2016 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 TTC3P53804 2025 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 FAM170AA1A519 330 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 CASTOR2A6NHX0 329 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 PQBP1O60828 265 aaKnown RBP14.98□□□□□ -0.01
SDF2-201ENST00000247020 POMCP01189 267 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 ERBB2P04626 1255 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 KRT3P12035 628 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 PCSK1P29120 753 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 ACADSBP45954 432 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 NOMO2Q5JPE7 1267 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 LRRC38Q5VT99 294 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 DCAF12L1Q5VU92 463 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 TMEM110Q86TL2 294 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 OSTM1Q86WC4 334 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 RHOT1Q8IXI2 618 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 C3orf58Q8NDZ4 430 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 DBF4BQ8NFT6 615 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 ALG3Q92685 438 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 MS4A14Q96JA4 679 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 HSFY1Q96LI6 401 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 RNPC3Q96LT9 517 aaKnown RBP14.98□□□□□ -0.01
SDF2-201ENST00000247020 MCEEQ96PE7 176 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 HIPK3Q9H422 1215 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 DPEP3Q9H4B8 488 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 ANKZF1Q9H8Y5 726 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 CDH9Q9ULB4 789 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 ENPP3O14638 875 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 HSPA8P11142 646 aaKnown RBP14.98□□□□□ -0.01
SDF2-201ENST00000247020 H2AFXP16104 143 aaPredicted RBP14.98□□□□□ -0.01
SDF2-201ENST00000247020 LMO2P25791 158 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 PLA2G4AP47712 749 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 GJA8P48165 433 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 SLC8A3P57103 927 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 C2orf54Q08AI8 447 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 FAAP100Q0VG06 881 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 CLLU1OSQ5K130 101 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 CYP4A22Q5TCH4 519 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 WSCD1Q658N2 575 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 LLGL2Q6P1M3 1020 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 WDR93Q6P2C0 686 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 METTL23Q86XA0 190 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 UBA3Q8TBC4 463 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 SUSD3Q96L08 255 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 FAM49BQ9NUQ9 324 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 DDX43Q9NXZ2 648 aaKnown RBP14.98□□□□□ -0.01
SDF2-201ENST00000247020 RAB21Q9UL25 225 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 INPP5FQ9Y2H2 1132 aa14.98□□□□□ -0.01
SDF2-201ENST00000247020 DNAH12Q6ZR08 3092 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 B3GAT3O94766 335 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 MYCP01106 439 aaPredicted RBP14.97□□□□□ -0.01
SDF2-201ENST00000247020 PDGFRBP09619 1106 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 PTPN1P18031 435 aaKnown RBP14.97□□□□□ -0.01
SDF2-201ENST00000247020 TYMPP19971 482 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 RFC2P35250 354 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 RPL7AP62424 266 aaKnown RBP14.97□□□□□ -0.01
SDF2-201ENST00000247020 PLCB3Q01970 1234 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 PTPROQ16827 1216 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 TIGD5Q53EQ6 642 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 ARCQ7LC44 396 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 KRT35Q92764 455 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 TRIM7Q9C029 511 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 RBM12Q9NTZ6 932 aaKnown RBP14.97□□□□□ -0.01
SDF2-201ENST00000247020 EHD2Q9NZN4 543 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 PCDHB7Q9Y5E2 793 aa14.97□□□□□ -0.01
SDF2-201ENST00000247020 FNDC1Q4ZHG4 1894 aaPredicted RBP14.97□□□□□ -0.01
SDF2-201ENST00000247020 LTBP2Q14767 1821 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 GOLGA6L10A0A0M3HER8 536 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 E5RJQ4 531 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 XPO1O14980 1071 aaKnown RBP14.96□□□□□ -0.01
SDF2-201ENST00000247020 FGGP02679 453 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 TLE2Q04725 743 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 PDE4CQ08493 712 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 BRD3Q15059 726 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 CD300LGQ6UXG3 332 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 POLNQ7Z5Q5 900 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 MTERF4Q7Z6M4 381 aaKnown RBP14.96□□□□□ -0.01
SDF2-201ENST00000247020 PHLDB2Q86SQ0 1253 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 COLGALT2Q8IYK4 626 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 KATNAL2Q8IYT4 538 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 MAIP1Q8WWC4 291 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 NCAPGQ9BPX3 1015 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 SYT15Q9BQS2 421 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 ACBD6Q9BR61 282 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 DUSP16Q9BY84 665 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 MRPL9Q9BYD2 267 aaKnown RBP14.96□□□□□ -0.01
SDF2-201ENST00000247020 ST7Q9NRC1 585 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 PTPRDP23468 1912 aa14.96□□□□□ -0.01
SDF2-201ENST00000247020 TET1Q8NFU7 2136 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms