RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SLC5A4Q9NY91 659 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 APOBEC2Q9Y235 224 aaKnown RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 EIF3DO15371 548 aaKnown RBP eCLIP12.07□□□□□ -0.48
SOX9-201ENST00000245479 CSPG5O95196 566 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 PAEPP09466 180 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 PSMC1P62191 440 aaKnown RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 CNGA3Q16281 694 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 ZNF572Q7Z3I7 529 aaPredicted RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 FAM13CQ8NE31 585 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 ZNF184Q99676 751 aaPredicted RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 OSBPL8Q9BZF1 889 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 POLIQ9UNA4 740 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 FRMPD4Q14CM0 1322 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 A0A0A6YYK5 440 aaPredicted RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 KRT36O76013 467 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 CST3P01034 146 aaPredicted RBP12.07□□□□□ -0.48
SOX9-201ENST00000245479 VTNP04004 478 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 TMEM63BQ5T3F8 832 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 PPM1NQ8N819 430 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 TMEM161BQ8NDZ6 487 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 TRIM11Q96F44 468 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 CLMNQ96JQ2 1002 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 NDNQ99608 321 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 MTFR1LQ9H019 292 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 WWP1Q9H0M0 922 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 ACAD9Q9H845 621 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 SLCO1B3Q9NPD5 702 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 TJP2Q9UDY2 1190 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 SLC12A4Q9UP95 1085 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 NR2E3Q9Y5X4 410 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 GLI3P10071 1580 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 ADM5C9JUS6 153 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 B4GALT5O43286 388 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 KRT37O76014 449 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 TMCC1O94876 653 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 RTN3O95197 1032 aaPredicted RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 SP100P23497 879 aaPredicted RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 TCF7P36402 384 aaPredicted RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 PDE1BQ01064 536 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 GRIK3Q13003 919 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 KLHL38Q2WGJ6 581 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 DUPD1Q68J44 220 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 LCA5Q86VQ0 697 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 ASAP3Q8TDY4 903 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 RMDN2Q96LZ7 410 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 PSMC3IPQ9P2W1 217 aaPredicted RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 KLHL33A6NCF5 533 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 SUPT3HO75486 399 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 BACE1P56817 501 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 TAS2R40P59535 323 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 TMEM132BQ14DG7 1078 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 CCDC92Q53HC0 331 aaPredicted RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 NUDCD3Q8IVD9 361 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 ATP11CQ8NB49 1132 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 INPP5DQ92835 1189 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 ACAP3Q96P50 834 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 FHDC1Q9C0D6 1143 aaPredicted RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 MANSC1Q9H8J5 431 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 MTO1Q9Y2Z2 717 aaKnown RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 TJP3O95049 919 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 JAK3P52333 1124 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 WNT7BP56706 349 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 DNAL1Q4LDG9 190 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 STYK1Q6J9G0 422 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 KDELC2Q7Z4H8 507 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 FAM228AQ86W67 206 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 SLC25A41Q8N5S1 370 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 MPP4Q96JB8 637 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 PPP1R36Q96LQ0 422 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 FAM192AQ9GZU8 254 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 AS3MTQ9HBK9 375 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 DDX18Q9NVP1 670 aaKnown RBP12.06□□□□□ -0.48
SOX9-201ENST00000245479 NMRK1Q9NWW6 199 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 INPP5FQ9Y2H2 1132 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 HES2Q9Y543 173 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 ZMYM2Q9UBW7 1377 aa12.06□□□□□ -0.48
SOX9-201ENST00000245479 PYGLP06737 847 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 BPIFB4P59827 614 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 CYP24A1Q07973 514 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 USP4Q13107 963 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 KRT81Q14533 505 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 KCTD2Q14681 263 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 HADHQ16836 314 aaKnown RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 ZNF772Q68DY9 489 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 ZBTB8OSQ8IWT0 167 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms