RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 EVPLQ92817 2033 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 OTOFQ9HC10 1997 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
HIF3A-202ENST00000244303 PRPF4O43172 522 aaKnown RBP eCLIP15.13■□□□□ 0.01
HIF3A-202ENST00000244303 TGFB3P10600 412 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 LACTBP83111 547 aaPredicted RBP15.13■□□□□ 0.01
HIF3A-202ENST00000244303 SLC25A11Q02978 314 aaKnown RBP15.13■□□□□ 0.01
HIF3A-202ENST00000244303 MAPK6Q16659 721 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 KCNT1Q5JUK3 1230 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 IER5Q5VY09 327 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 RNF43Q68DV7 783 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 TRIM50Q86XT4 487 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 ECHDC2Q86YB7 292 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 ERO1BQ86YB8 467 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 ANKMY2Q8IV38 441 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 THNSL1Q8IYQ7 743 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 DENND1AQ8TEH3 1009 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 SEPT1Q8WYJ6 367 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 GRAMD1AQ96CP6 724 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 ZNF668Q96K58 619 aaPredicted RBP15.13■□□□□ 0.01
HIF3A-202ENST00000244303 ADAM33Q9BZ11 813 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 DONSONQ9NYP3 566 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 CYTH4Q9UIA0 394 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 CXCL11O14625 94 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 LRCH4O75427 683 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ITGBL1O95965 494 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 CD19P15391 556 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 IL1R2P27930 398 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 RAP1GAPP47736 663 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 GDF10P55107 478 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 OTUD4Q01804 1114 aaKnown RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 GAD2Q05329 585 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 DNAJC3Q13217 504 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 SURF1Q15526 300 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 POLNQ7Z5Q5 900 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 CDR2LQ86X02 465 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ZBTB8OSQ8IWT0 167 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 KIF2BQ8N4N8 673 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ARFGAP1Q8N6T3 406 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 CEP120Q8N960 986 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ANKLE1Q8NAG6 615 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ACTL9Q8TC94 416 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 SPOCK2Q92563 424 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 KLHL29Q96CT2 875 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 TBC1D31Q96DN5 1066 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 GRID1Q9ULK0 1009 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 STRIP2Q9ULQ0 834 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 PGK2P07205 417 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 KRT3P12035 628 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 RPA3P35244 121 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 RIPK1Q13546 671 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ACVR2BQ13705 512 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ZNF268Q14587 947 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 METTL7BQ6UX53 244 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 ANKRD13AQ8IZ07 590 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
HIF3A-202ENST00000244303 THOC1Q96FV9 657 aaKnown RBP15.12■□□□□ 0.01
HIF3A-202ENST00000244303 A0A1W2PPM1 405 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 SIGLEC16A6NMB1 481 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 SOCS7O14512 581 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 CST8O60676 142 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 SLC25A27O95847 323 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 TNNC2P02585 160 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
HIF3A-202ENST00000244303 GPX6P59796 221 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 SPARCL1Q14515 664 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 MXD4Q14582 209 aaPredicted RBP15.11■□□□□ 0.01
HIF3A-202ENST00000244303 HIF1AQ16665 826 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 ANKRD22Q5VYY1 191 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 RHPN2Q8IUC4 686 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 ANKRD36BP1Q96IX9 119 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 FAM167AQ96KS9 214 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 PHTF1Q9UMS5 762 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 TRIM33Q9UPN9 1127 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 CLUHO75153 1309 aa15.11■□□□□ 0.01
HIF3A-202ENST00000244303 SPDYE5A6NIY4 337 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 ZBTB42B2RXF5 422 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 MAGEB2O15479 319 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 KIF1CO43896 1103 aaKnown RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 ARIH2O95376 493 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 GJB1P08034 283 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 KRT19P08727 400 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 CD48P09326 243 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 CA4P22748 312 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 POLR2BP30876 1174 aaKnown RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 YWHAEP62258 255 aaKnown RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 ORC1Q13415 861 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 Q3C1V9 767 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 MPZL3Q6UWV2 235 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 TMEM130Q8N3G9 435 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 EMC1Q8N766 993 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 CPT1BQ92523 772 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 FGD4Q96M96 766 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 SLCO1B3Q9NPD5 702 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms