RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SYDE1Q6ZW31 735 aaPredicted RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 ECHDC2Q86YB7 292 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 WDR49Q8IV35 697 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 RBM41Q96IZ5 413 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 VCPIP1Q96JH7 1222 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 C12orf42Q96LP6 360 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 HEXIM2Q96MH2 286 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 TRIM56Q9BRZ2 755 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 NOD2Q9HC29 1040 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 SIX4Q9UIU6 781 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 CPSF3Q9UKF6 684 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 IGKV6D-21A0A0A0MT36 114 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 TCRBV5S1A1TA0A578 114 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 FAM47DPA6NHR8 397 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 LACTBL1A8MY62 500 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CHUKO15111 745 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CALB1P05937 261 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 RPL22P35268 128 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 MKRN3Q13064 507 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ITIH4Q14624 930 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 STAT4Q14765 748 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 PLCB4Q15147 1175 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 OASLQ15646 514 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 FAM160B1Q5W0V3 765 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 TRABD2AQ86V40 505 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 IGDCC3Q8IVU1 814 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ZBTB8OSQ8IWT0 167 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 C1orf127Q8N9H9 656 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 RSAD2Q8WXG1 361 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 GPR20Q99678 358 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 TACO1Q9BSH4 297 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 VPS33BQ9H267 617 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 DCTN4Q9UJW0 460 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 SLC12A4Q9UP95 1085 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CNTN6Q9UQ52 1028 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CHMP2BQ9UQN3 213 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 A0A087WZ62 844 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ABLIM1O14639 778 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 HCRTO43612 131 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 TNNC2P02585 160 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 MIPP30301 263 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CDC25CP30307 473 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ICAM3P32942 547 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CAV1Q03135 178 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 R3HDM1Q15032 1099 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 RNASEH2BQ5TBB1 312 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 JADE1Q6IE81 842 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ZNF449Q6P9G9 518 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 METTL7BQ6UX53 244 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ARHGEF18Q6ZSZ5 1173 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CROCCP2Q86T23 111 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 UBR7Q8N806 425 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 DNERQ8NFT8 737 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 PYROXD1Q8WU10 500 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CFAP57Q96MR6 1250 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 FDXACB1Q9BRP7 624 aaPredicted RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 WDR83Q9BRX9 315 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ELOVL4Q9GZR5 314 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CCDC134Q9H6E4 229 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 GINM1Q9NU53 330 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CEP83Q9Y592 693 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 LOXHD1Q8IVV2 1947 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CLUHO75153 1309 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 M0QYV0 167 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ATP2A1O14983 1001 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 FAM155BO75949 473 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 TMEM63AO94886 807 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ATP6V1G2O95670 118 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 YY1P25490 414 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ATP5DP30049 168 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 RAD23BP54727 409 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 NEDD9Q14511 834 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 HIF1AQ16665 826 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 AMHR2Q16671 573 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ZNF667Q5HYK9 610 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 FAM102AQ5T9C2 384 aaPredicted RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 FBXO36Q8NEA4 188 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CHST13Q8NET6 341 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CPT1BQ92523 772 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 STAMBPL1Q96FJ0 436 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 ANKRD36BP1Q96IX9 119 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 CDT1Q9H211 546 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 RPF1Q9H9Y2 349 aaKnown RBP9.61□□□□□ -0.87
SYDE2-201ENST00000234668 GPRC5DQ9NZD1 345 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 HEY1Q9Y5J3 304 aa9.61□□□□□ -0.87
SYDE2-201ENST00000234668 C2orf71A6NGG8 1288 aa9.6□□□□□ -0.87
SYDE2-201ENST00000234668 C3orf70A6NLC5 250 aaPredicted RBP9.6□□□□□ -0.87
SYDE2-201ENST00000234668 SOCS7O14512 581 aa9.6□□□□□ -0.87
SYDE2-201ENST00000234668 DNAJC8O75937 253 aaPredicted RBP9.6□□□□□ -0.87
SYDE2-201ENST00000234668 OAS1P00973 400 aaKnown RBP9.6□□□□□ -0.87
SYDE2-201ENST00000234668 TXNP10599 105 aaKnown RBP9.6□□□□□ -0.87
SYDE2-201ENST00000234668 KDELR1P24390 212 aa9.6□□□□□ -0.87
SYDE2-201ENST00000234668 TARSP26639 723 aaKnown RBP9.6□□□□□ -0.87
SYDE2-201ENST00000234668 RFC5P40937 340 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms